Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1935 NP_671714 18 1935 NP_001230647 18 1935 NP_115520 18 1935 NP_002860 18 1935 NP_942599 18 1935 NP_057661 18 1935 XP_006715890 18 1935 XP_005250160 18 1935 XP_005250159 18 1935 NP_001071105 18 1935 NP_056343 17 3301 XP_005256660 17 3301 XP_005256659 17 3301 XP_005256658 17 3301 XP_005256656 17 3301 XP_006721565 17 3301 XP_006721564 17 3301 XP_006721563 17 3301 XP_005256655 17 3301 XP_005256654 17 3301 XP_006721562 17 3301 NP_068834 17 4312 XP_005250186 17 4312 NP_919299 16 5631 NP_659502 16 5631 NP_001230064 16 5631 NP_001075949 16 5631 NP_001248772 16 5631 NP_001230065 16 5631 XP_006725158 16 5631 XP_006719831 16 5631 XP_006718547 16 5631 XP_006716771 16 5631 NP_001091980 16 5631 NP_055604 16 5631 NP_008835 16 7355 NP_001075109 16 7355 NP_002542 16 7355 NP_001138502 16 7355 NP_060371 16 7355 XP_005260860 16 7355 XP_005260859 16 7355 XP_005260858 16 7355 XP_005260857 16 7355 XP_006723671 16 7355 XP_006723670 16 7355 XP_005260854 16 7355 XP_006723669 16 7355 XP_005253963 16 7355 XP_005253962 16 7355 XP_006719124 16 7355 XP_005253405 16 7355 NP_001137291 16 7355 NP_071927 16 7355 NP_777601 16 7355 NP_055519 15 9605 NP_689845 15 9605 NP_001178249 15 9605 NP_001265560 15 9605 NP_055238 15 9605 NP_001178250 15 9605 NP_071423 15 9605 NP_068712 15 9605 NP_000805 15 9605 XP_006718329 15 9605 XP_006718328 15 9605 XP_006714730 15 9605 XP_005272100 15 9605 XP_005248564 15 9605 XP_006714650 15 9605 XP_005272020 15 9605 XP_005244872 15 9605 NP_005900 15 9605>NP_005742 Length = 3907 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFLGERSVL 9 VFL ERSVL Sbjct: 3033 VFLEERSVL 3041>NP_671714 Length = 3899 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFLGERSVL 9 VFL ERSVL Sbjct: 3025 VFLEERSVL 3033>NP_001230647 Length = 104 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VFLGERSV 8 VFLGE+SV Sbjct: 17 VFLGEQSV 24>NP_115520 Length = 254 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VFLGERSV 8 VFLGE+SV Sbjct: 17 VFLGEQSV 24>NP_002860 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VFLGERSV 8 VFLGE+SV Sbjct: 17 VFLGEQSV 24>NP_942599 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VFLGERSV 8 VFLGE+SV Sbjct: 17 VFLGEQSV 24>NP_057661 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VFLGERSV 8 VFLGE+SV Sbjct: 17 VFLGEQSV 24>XP_006715890 Length = 3860 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFLGERSVL 9 VFL ERSVL Sbjct: 2986 VFLEERSVL 2994>XP_005250160 Length = 3939 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFLGERSVL 9 VFL ERSVL Sbjct: 3065 VFLEERSVL 3073>XP_005250159 Length = 3952 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VFLGERSVL 9 VFL ERSVL Sbjct: 3078 VFLEERSVL 3086>NP_001071105 Length = 254 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VFLGERSV 8 VFLGE+SV Sbjct: 17 VFLGEQSV 24>NP_056343 Length = 350 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_005256660 Length = 315 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 103 VFIGERS 109>XP_005256659 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 103 VFIGERS 109>XP_005256658 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 103 VFIGERS 109>XP_005256656 Length = 350 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_006721565 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_006721564 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_006721563 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_005256655 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_005256654 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>XP_006721562 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 VF+GERS Sbjct: 138 VFIGERS 144>NP_068834 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGERSVL 9 FLG RSV+ Sbjct: 182 FLGNRSVI 189>XP_005250186 Length = 332 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGERSVL 9 FLG RSV+ Sbjct: 64 FLGNRSVI 71>NP_919299 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VFLGER 6 VFLGER Sbjct: 372 VFLGER 377>NP_659502 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 +FLGER+ Sbjct: 214 IFLGERA 220>NP_001230064 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 +FLGER+ Sbjct: 151 IFLGERA 157>NP_001075949 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 + LGERSV Sbjct: 480 IHLGERSV 487>NP_001248772 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 + LGERSV Sbjct: 480 IHLGERSV 487>NP_001230065 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 +FLGER+ Sbjct: 107 IFLGERA 113>XP_006725158 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 + LGERSV Sbjct: 480 IHLGERSV 487>XP_006719831 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VFLGER 6 VFLGER Sbjct: 353 VFLGER 358>XP_006718547 Length = 445 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 +FLGER+ Sbjct: 190 IFLGERA 196>XP_006716771 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 + LGERSV Sbjct: 480 IHLGERSV 487>NP_001091980 Length = 445 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VFLGERS 7 +FLGER+ Sbjct: 190 IFLGERA 196>NP_055604 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 + LGERSV Sbjct: 520 IHLGERSV 527>NP_008835 Length = 4128 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 F+GER+V Sbjct: 1270 FIGERTV 1276>NP_001075109 Length = 4097 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 F+GER+V Sbjct: 1270 FIGERTV 1276>NP_002542 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 +FLG RS+ Sbjct: 313 IFLGRRSL 320>NP_001138502 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGERSVL 9 FLG+ SVL Sbjct: 1057 FLGKHSVL 1064>NP_060371 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFLGERS 7 VFLG RS Sbjct: 756 VFLGRRS 762>XP_005260860 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_005260859 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_005260858 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_005260857 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_006723671 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_006723670 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_005260854 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_006723669 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>XP_005253963 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFLGERS 7 VFLG RS Sbjct: 688 VFLGRRS 694>XP_005253962 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFLGERS 7 VFLG RS Sbjct: 810 VFLGRRS 816>XP_006719124 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 ++GERSV Sbjct: 964 YIGERSV 970>XP_005253405 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 ++GERSV Sbjct: 964 YIGERSV 970>NP_001137291 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFLGERS 7 VFLG RS Sbjct: 828 VFLGRRS 834>NP_071927 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VFLGERSV 8 VFL E+SV Sbjct: 63 VFLNEKSV 70>NP_777601 Length = 1453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 ++GERSV Sbjct: 954 YIGERSV 960>NP_055519 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VFLGERS 7 +F GERS Sbjct: 755 IFCGERS 761>NP_689845 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FLGERS 7 F+GERS Sbjct: 425 FMGERS 430>NP_001178249 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 FLG+RS+ Sbjct: 330 FLGDRSL 336>NP_001265560 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 FLG+RS+ Sbjct: 330 FLGDRSL 336>NP_055238 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 F+G+RS+ Sbjct: 65 FIGDRSI 71>NP_001178250 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 FLG+RS+ Sbjct: 344 FLGDRSL 350>NP_071423 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GERSVL 9 GERSVL Sbjct: 608 GERSVL 613>NP_068712 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 FLG+RS+ Sbjct: 415 FLGDRSL 421>NP_000805 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 FLG+RS+ Sbjct: 415 FLGDRSL 421>XP_006718329 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GERSVL 9 GERSVL Sbjct: 390 GERSVL 395>XP_006718328 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GERSVL 9 GERSVL Sbjct: 390 GERSVL 395>XP_006714730 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GERSVL 9 GERSVL Sbjct: 235 GERSVL 240>XP_005272100 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GERSVL 9 GERSVL Sbjct: 580 GERSVL 585>XP_005248564 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGERSV 8 LGERSV Sbjct: 1146 LGERSV 1151>XP_006714650 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 F+G+RS+ Sbjct: 65 FIGDRSI 71>XP_005272020 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FLGERSV 8 F+G+RS+ Sbjct: 65 FIGDRSI 71>XP_005244872 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VFLGERS 7 +F GERS Sbjct: 791 IFCGERS 797>NP_005900 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LGERSV 8 LGERSV Sbjct: 1272 LGERSV 1277Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.153 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,734 Number of extensions: 520 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |