Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 19 869 XP_005248577 19 869 XP_005248576 19 869 NP_056466 17 2528 NP_001273771 17 2528 NP_001273769 17 2528 XP_006717109 17 2528 XP_006717108 17 2528 XP_005251963 17 2528 NP_001186020 17 4312 NP_001157865 17 4312 NP_001186014 17 4312 NP_031384 17 4312 NP_775804 17 4312 NP_001186018 17 4312 NP_001186021 17 4312 NP_001157864 17 4312 NP_001157863 17 4312 XP_005258187 17 4312 XP_006718465 17 4312 XP_005244992 17 4312 XP_006711258 17 4312 XP_005244991 17 4312 NP_001073678 17 4312 NP_079023 16 7355 NP_000248 15 9605 NP_006199 15 9605 NP_001239155 15 9605 NP_006613 15 9605 NP_001073283 15 9605 NP_694567 15 9605 NP_055506 15 9605 NP_004064 15 9605 NP_001208 15 9605 NP_001018054 15 9605 NP_001018057 15 9605 NP_079328 15 9605 NP_001269812 15 9605 NP_001018056 15 9605 XP_005267754 15 9605 XP_005267753 15 9605 XP_005253356 15 9605 XP_006719092 15 9605 XP_005267074 15 9605 XP_006712837 15 9605>NP_005912 Length = 1512 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FGAAARLA 9 FGAAARLA Sbjct: 1389 FGAAARLA 1396>XP_005248577 Length = 1349 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FGAAARLA 9 FGAAARLA Sbjct: 1226 FGAAARLA 1233>XP_005248576 Length = 1375 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 FGAAARLA 9 FGAAARLA Sbjct: 1252 FGAAARLA 1259>NP_056466 Length = 580 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA RLA Sbjct: 543 FGAAGRLA 550>NP_001273771 Length = 371 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA RLA Sbjct: 334 FGAAGRLA 341>NP_001273769 Length = 599 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA RLA Sbjct: 562 FGAAGRLA 569>XP_006717109 Length = 407 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA RLA Sbjct: 370 FGAAGRLA 377>XP_006717108 Length = 580 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA RLA Sbjct: 543 FGAAGRLA 550>XP_005251963 Length = 580 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA RLA Sbjct: 543 FGAAGRLA 550>NP_001186020 Length = 981 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 958 GAAARLA 964>NP_001157865 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA R+A Sbjct: 454 FGAAGRIA 461>NP_001186014 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 1012 GAAARLA 1018>NP_031384 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA R+A Sbjct: 556 FGAAGRIA 563>NP_775804 Length = 981 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 958 GAAARLA 964>NP_001186018 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 1012 GAAARLA 1018>NP_001186021 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 513 GAAARLA 519>NP_001157864 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA R+A Sbjct: 499 FGAAGRIA 506>NP_001157863 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAA R+A Sbjct: 454 FGAAGRIA 461>XP_005258187 Length = 621 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAAA LA Sbjct: 273 FGAAAMLA 280>XP_006718465 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 77 GAAARLA 83>XP_005244992 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 1012 GAAARLA 1018>XP_006711258 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 1012 GAAARLA 1018>XP_005244991 Length = 1035 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARLA Sbjct: 1012 GAAARLA 1018>NP_001073678 Length = 621 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 FGAAARLA 9 FGAAA LA Sbjct: 273 FGAAAMLA 280>NP_079023 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGAAARL 8 FG AARL Sbjct: 16 FGGAARL 22>NP_000248 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VFGAAA 6 VFGAAA Sbjct: 8 VFGAAA 13>NP_006199 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VFGAAARL 8 ++G AARL Sbjct: 450 IYGPAARL 457>NP_001239155 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGAAARL 8 FG AARL Sbjct: 210 FGLAARL 216>NP_006613 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGAAARL 8 FG AARL Sbjct: 224 FGLAARL 230>NP_001073283 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFGAAAR 7 VFG AAR Sbjct: 107 VFGPAAR 113>NP_694567 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFGAAAR 7 VFG AAR Sbjct: 87 VFGPAAR 93>NP_055506 Length = 1485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VFGAAARLA 9 VFG AR+A Sbjct: 503 VFGGWARMA 511>NP_004064 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FGAAARL 8 FG AARL Sbjct: 204 FGLAARL 210>NP_001208 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GAAARLA 9 GAAARL+ Sbjct: 2 GAAARLS 8>NP_001018054 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGAAARLA 9 FG A RLA Sbjct: 1092 FGCARRLA 1099>NP_001018057 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGAAARLA 9 FG A RLA Sbjct: 339 FGCARRLA 346>NP_079328 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGAAARLA 9 FG A RLA Sbjct: 1205 FGCARRLA 1212>NP_001269812 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGAAARLA 9 FG A RLA Sbjct: 337 FGCARRLA 344>NP_001018056 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGAAARLA 9 FG A RLA Sbjct: 387 FGCARRLA 394>XP_005267754 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VFGAAA 6 VFGAAA Sbjct: 8 VFGAAA 13>XP_005267753 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VFGAAA 6 VFGAAA Sbjct: 8 VFGAAA 13>XP_005253356 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFGAAAR 7 VFG AAR Sbjct: 94 VFGPAAR 100>XP_006719092 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFGAAAR 7 VFG AAR Sbjct: 107 VFGPAAR 113>XP_005267074 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VFGAAARL 8 ++G AARL Sbjct: 80 IYGPAARL 87>XP_006712837 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FGAAARLA 9 FG A RLA Sbjct: 1205 FGCARRLA 1212Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.138 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 302,454 Number of extensions: 194 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |