Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 390 NP_006397 17 2528 XP_005274495 17 2528 NP_001180197 17 4312 NP_036287 17 4312 NP_001180198 17 4312 NP_001257661 17 4312 XP_006723189 17 4312 XP_006723188 17 4312 NP_006784 16 5631 NP_054817 16 5631 NP_060134 16 5631 NP_001240841 16 5631 NP_055988 16 5631 NP_001194005 16 5631 NP_543024 16 5631 NP_001027025 16 5631 XP_006723777 16 5631 XP_005260352 16 5631 XP_005252972 16 5631 XP_006714063 16 5631 XP_005262705 16 5631 XP_006714062 16 5631 XP_005262704 16 5631 XP_005262703 16 5631 NP_001120653 16 7355 NP_001164653 16 7355 NP_201576 16 7355 NP_005036 16 7355 NP_774959 16 7355 NP_932348 16 7355 XP_005256402 16 7355 XP_006722342 16 7355 NP_065095 15 9605 NP_006614 15 9605 NP_001120691 15 9605 NP_115981 15 9605 XP_006718411 15 9605 XP_005253229 15 9605 XP_006718410 15 9605 XP_005253228 15 9605 XP_005253227 15 9605 XP_005246000 15 9605>NP_004351 Length = 882 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VEVSKDFGV 9 VEVS+DFGV Sbjct: 493 VEVSEDFGV 501>NP_006397 Length = 271 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVSKDFGV 9 ++SKD+GV Sbjct: 183 QISKDYGV 190>XP_005274495 Length = 257 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EVSKDFGV 9 ++SKD+GV Sbjct: 169 QISKDYGV 176>NP_001180197 Length = 850 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 VEV +DFG Sbjct: 532 VEVPEDFG 539>NP_036287 Length = 649 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 VEV +DFG Sbjct: 331 VEVPEDFG 338>NP_001180198 Length = 796 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 VEV +DFG Sbjct: 478 VEVPEDFG 485>NP_001257661 Length = 128 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVSKDFG 8 E+S+DFG Sbjct: 73 EISEDFG 79>XP_006723189 Length = 795 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 VEV +DFG Sbjct: 477 VEVPEDFG 484>XP_006723188 Length = 849 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 VEV +DFG Sbjct: 531 VEVPEDFG 538>NP_006784 Length = 256 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EVSKDFGV 9 ++S+D+GV Sbjct: 167 QISRDYGV 174>NP_054817 Length = 238 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EVSKDFGV 9 ++S+D+GV Sbjct: 149 QISRDYGV 156>NP_060134 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEVSKDFGV 9 +E S+DFGV Sbjct: 216 LEDSEDFGV 224>NP_001240841 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>NP_055988 Length = 1168 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>NP_001194005 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VSKDFG 8 +SKDFG Sbjct: 270 ISKDFG 275>NP_543024 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VSKDFG 8 +SKDFG Sbjct: 270 ISKDFG 275>NP_001027025 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 394 SKDFGI 399>XP_006723777 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VSKDFG 8 +SKDFG Sbjct: 163 ISKDFG 168>XP_005260352 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VSKDFG 8 +SKDFG Sbjct: 270 ISKDFG 275>XP_005252972 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 213 SKDFGI 218>XP_006714063 Length = 1168 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>XP_005262705 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>XP_006714062 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>XP_005262704 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>XP_005262703 Length = 1275 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EVSKDFGV 9 EVS DFG+ Sbjct: 16 EVSVDFGL 23>NP_001120653 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEVSKDFGV 9 VEV +DF + Sbjct: 109 VEVGEDFNI 117>NP_001164653 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEVSKDFGV 9 VEV +DF + Sbjct: 109 VEVGEDFNI 117>NP_201576 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEVSKDFGV 9 VEV +DF + Sbjct: 109 VEVGEDFNI 117>NP_005036 Length = 3460 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 +E S+DFG Sbjct: 2041 LEFSRDFG 2048>NP_774959 Length = 3458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 +E S+DFG Sbjct: 2041 LEFSRDFG 2048>NP_932348 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EVSKDF 7 E+SKDF Sbjct: 511 EISKDF 516>XP_005256402 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EVSKDF 7 E+SKDF Sbjct: 511 EISKDF 516>XP_006722342 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EVSKDF 7 E+SKDF Sbjct: 522 EISKDF 527>NP_065095 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 + +SK+FG Sbjct: 154 IHISKNFG 161>NP_006614 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EVSKDFGV 9 EVS FGV Sbjct: 181 EVSASFGV 188>NP_001120691 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 322 SKDFGM 327>NP_115981 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 322 SKDFGM 327>XP_006718411 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 140 SKDFGM 145>XP_005253229 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 192 SKDFGM 197>XP_006718410 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 201 SKDFGM 206>XP_005253228 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 322 SKDFGM 327>XP_005253227 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SKDFGV 9 SKDFG+ Sbjct: 322 SKDFGM 327>XP_005246000 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VEVSKDFG 8 + +SK+FG Sbjct: 154 IHISKNFG 161Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.139 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 494,745 Number of extensions: 476 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |