Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 17 2528 NP_036462 17 2528 NP_001243397 17 2528 NP_001135920 17 2528 NP_001092882 17 2528 NP_006757 17 2528 NP_001092883 17 2528 NP_001135921 17 2528 XP_006721159 17 2528 XP_005255675 17 2528 XP_005269721 17 2528 XP_005273706 17 2528 NP_001135923 17 2528 NP_114427 17 2528 NP_001135922 17 2528 NP_001186084 17 3301 NP_001186085 17 3301 NP_001186087 17 3301 NP_001186086 17 3301 NP_008998 17 3301 XP_006726849 17 3301 XP_006726848 17 3301 XP_006726847 17 3301 XP_006726846 17 3301 XP_006726845 17 3301 XP_006723592 17 3301 XP_006723591 17 3301 XP_006723590 17 3301 XP_006723589 17 3301 XP_006723588 17 3301 XP_006710119 17 3301 XP_006710118 17 3301 XP_006710117 17 3301 XP_006710116 17 3301 XP_006710115 17 3301 NP_001001954 17 4312 NP_071351 16 5631 NP_001136336 16 5631 XP_006721417 16 5631 XP_006721416 16 5631 NP_892003 16 5631 NP_115564 16 5631 NP_002652 16 7355 NP_005631 16 7355 XP_006722591 16 7355 NP_001005486 16 7355 NP_001129391 15 9605 NP_861450 15 9605 NP_003483 15 9605 NP_689738 15 9605 NP_644807 15 9605 NP_115971 15 9605 NP_001161688 15 9605 NP_001063 15 9605 NP_001161689 15 9605 NP_001161693 15 9605 NP_062564 15 9605 NP_001265497 15 9605 NP_004496 15 9605 XP_003960419 15 9605 XP_005256902 15 9605 XP_005266418 15 9605 XP_003846394 15 9605 XP_006712399 15 9605 XP_006712398 15 9605 XP_006712397 15 9605 XP_006712396 15 9605 XP_006712395 15 9605 XP_006712394 15 9605 XP_005246404 15 9605 XP_003846733 15 9605 NP_277040 15 9605>NP_001243398 Length = 1781 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 529 VEPFLFYVL 537>NP_036462 Length = 2073 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 821 VEPFLFYVL 829>NP_001243397 Length = 1890 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 638 VEPFLFYVL 646>NP_001135920 Length = 528 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 368 PFLFLSL 374>NP_001092882 Length = 2004 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 610 VEPFLFYVL 618>NP_006757 Length = 2004 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 610 VEPFLFYVL 618>NP_001092883 Length = 2004 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 610 VEPFLFYVL 618>NP_001135921 Length = 454 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 294 PFLFLSL 300>XP_006721159 Length = 521 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 361 PFLFLSL 367>XP_005255675 Length = 573 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 413 PFLFLSL 419>XP_005269721 Length = 2073 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 821 VEPFLFYVL 829>XP_005273706 Length = 1997 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPFLF L Sbjct: 603 VEPFLFYVL 611>NP_001135923 Length = 476 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 316 PFLFLSL 322>NP_114427 Length = 528 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 368 PFLFLSL 374>NP_001135922 Length = 455 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PFLF+SL Sbjct: 295 PFLFLSL 301>NP_001186084 Length = 581 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 VEPFLF Sbjct: 408 VEPFLF 413>NP_001186085 Length = 472 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 VEPFLF Sbjct: 299 VEPFLF 304>NP_001186087 Length = 442 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 VEPFLF Sbjct: 269 VEPFLF 274>NP_001186086 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 VEPFLF Sbjct: 328 VEPFLF 333>NP_008998 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 VEPFLF Sbjct: 438 VEPFLF 443>XP_006726849 Length = 138 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006726848 Length = 139 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006726847 Length = 141 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006726846 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006726845 Length = 150 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006723592 Length = 138 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006723591 Length = 139 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006723590 Length = 141 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006723589 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006723588 Length = 150 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006710119 Length = 138 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006710118 Length = 139 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006710117 Length = 141 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006710116 Length = 144 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>XP_006710115 Length = 150 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EPFL MSL Sbjct: 5 EPFLKMSL 12>NP_001001954 Length = 324 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 PF+FM+L Sbjct: 317 PFIFMTL 323>NP_071351 Length = 2752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PFLFMSL 9 P LFMSL Sbjct: 2419 PLLFMSL 2425>NP_001136336 Length = 2521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PFLFMSL 9 P LFMSL Sbjct: 2190 PLLFMSL 2196>XP_006721417 Length = 2497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PFLFMSL 9 P LFMSL Sbjct: 2166 PLLFMSL 2172>XP_006721416 Length = 2504 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PFLFMSL 9 P LFMSL Sbjct: 2173 PLLFMSL 2179>NP_892003 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPF+F L Sbjct: 280 VEPFVFYIL 288>NP_115564 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 VEPF+F L Sbjct: 280 VEPFVFYIL 288>NP_002652 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EPFLFM 7 EPFLF+ Sbjct: 282 EPFLFV 287>NP_005631 Length = 862 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EPFLFM 7 EPFLF+ Sbjct: 652 EPFLFI 657>XP_006722591 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 EPFLFM 7 EPFLF+ Sbjct: 652 EPFLFI 657>NP_001005486 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VEPFLFMS 8 ++PFLF++ Sbjct: 47 LQPFLFLT 54>NP_001129391 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VEPFLFMS 8 VEP +F+S Sbjct: 6 VEPAIFLS 13>NP_861450 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VEPFLFMS 8 VEP +F+S Sbjct: 6 VEPAIFLS 13>NP_003483 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PFLFMSL 9 P+LF+SL Sbjct: 139 PWLFLSL 145>NP_689738 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>NP_644807 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EPFLFMS 8 EPFL+ S Sbjct: 237 EPFLYSS 243>NP_115971 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 +PF F+SL Sbjct: 904 DPFNFLSL 911>NP_001161688 Length = 395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>NP_001063 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEPFLFMSL 9 +EP+LF L Sbjct: 217 LEPYLFYCL 225>NP_001161689 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>NP_001161693 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>NP_062564 Length = 169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 V+PFLF Sbjct: 114 VKPFLF 119>NP_001265497 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 V+PFLF Sbjct: 79 VKPFLF 84>NP_004496 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 +PF F+SL Sbjct: 702 DPFNFLSL 709>XP_003960419 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 V+PFLF Sbjct: 40 VKPFLF 45>XP_005256902 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 +PF F+SL Sbjct: 702 DPFNFLSL 709>XP_005266418 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VEPFLFMS 8 VEP +F+S Sbjct: 6 VEPAIFLS 13>XP_003846394 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 V+PFLF Sbjct: 40 VKPFLF 45>XP_006712399 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_006712398 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_006712397 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_006712396 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_006712395 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_006712394 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_005246404 Length = 1821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EPFLFMSL 9 EP +FM+L Sbjct: 260 EPSMFMNL 267>XP_003846733 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEPFLF 6 V+PFLF Sbjct: 40 VKPFLF 45>NP_277040 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 EPFLF 6 EPFLF Sbjct: 210 EPFLF 214Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.154 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 525,361 Number of extensions: 563 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |