Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_776297 16 5631 NP_001230301 16 5631 NP_001820 16 5631 NP_001230303 16 5631 XP_005262783 16 5631 XP_006726466 16 7355 XP_006712969 16 7355 XP_005275995 16 7355 NP_001073883 15 9605 NP_005537 15 9605 NP_001243000 15 9605 NP_036329 15 9605 NP_001135741 15 9605 NP_000812 15 9605 NP_001273542 15 9605 NP_067639 15 9605 NP_037511 15 9605 NP_653221 15 9605 NP_073602 15 9605 NP_001152763 15 9605 NP_001243316 15 9605 NP_001243315 15 9605 NP_001243314 15 9605 NP_001138490 15 9605 XP_005257614 15 9605 XP_005257603 15 9605 XP_006722058 15 9605 XP_005257602 15 9605 XP_005267748 15 9605 XP_006718884 15 9605 XP_006718882 15 9605 XP_006718879 15 9605 XP_006717146 15 9605 XP_005266132 15 9605 XP_006717095 15 9605 XP_006717094 15 9605 XP_005251923 15 9605 XP_005264316 15 9605 XP_005270516 15 9605 NP_114062 15 9605 NP_061734 15 9605>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4450 VELALRRGL 4458>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4466 VELALRRGL 4474>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4467 VELALRRGL 4475>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4498 VELALRRGL 4506>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4522 VELALRRGL 4530>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4521 VELALRRGL 4529>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4521 VELALRRGL 4529>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4521 VELALRRGL 4529>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 VELALRR L Sbjct: 4522 VELALRRGL 4530>NP_776297 Length = 866 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 V ALRRDL Sbjct: 704 VGFALRRDL 712>NP_001230301 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 V ALRRDL Sbjct: 677 VGFALRRDL 685>NP_001820 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 V ALRRDL Sbjct: 704 VGFALRRDL 712>NP_001230303 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 V ALRRDL Sbjct: 677 VGFALRRDL 685>XP_005262783 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 V ALRRDL Sbjct: 677 VGFALRRDL 685>XP_006726466 Length = 1310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELALRRD 8 ELALRR+ Sbjct: 130 ELALRRE 136>XP_006712969 Length = 1310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELALRRD 8 ELALRR+ Sbjct: 130 ELALRRE 136>XP_005275995 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELALRRD 8 ELALRR+ Sbjct: 130 ELALRRE 136>NP_001073883 Length = 2028 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALRRDL 9 ALRRDL Sbjct: 798 ALRRDL 803>NP_005537 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ELALRRD 8 ELALRR+ Sbjct: 189 ELALRRN 195>NP_001243000 Length = 5207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LALRRDL 9 LAL+RDL Sbjct: 4788 LALQRDL 4794>NP_036329 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELALRRDL 9 ++ALR+DL Sbjct: 867 KIALRKDL 874>NP_001135741 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELALRRDL 9 ELAL +DL Sbjct: 551 ELALEQDL 558>NP_000812 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELALRRDL 9 ELAL +DL Sbjct: 608 ELALEQDL 615>NP_001273542 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VELALRR 7 +ELALRR Sbjct: 971 LELALRR 977>NP_067639 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VELALRR 7 +ELALRR Sbjct: 1 MELALRR 7>NP_037511 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALRRDL 9 ALRRDL Sbjct: 144 ALRRDL 149>NP_653221 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 +ELA+ RD+ Sbjct: 157 LELAVNRDI 165>NP_073602 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VELALRR 7 +ELALRR Sbjct: 952 LELALRR 958>NP_001152763 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VELALRR 7 +ELALRR Sbjct: 866 LELALRR 872>NP_001243316 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 +ELA+ RD+ Sbjct: 157 LELAVNRDI 165>NP_001243315 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 +ELA+ RD+ Sbjct: 157 LELAVNRDI 165>NP_001243314 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 +ELA+ RD+ Sbjct: 157 LELAVNRDI 165>NP_001138490 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LALRRD 8 LALRRD Sbjct: 45 LALRRD 50>XP_005257614 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VELALRR 7 +ELALRR Sbjct: 1 MELALRR 7>XP_005257603 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LALRRDL 9 LAL+RDL Sbjct: 4837 LALQRDL 4843>XP_006722058 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LALRRDL 9 LAL+RDL Sbjct: 4837 LALQRDL 4843>XP_005257602 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LALRRDL 9 LAL+RDL Sbjct: 4837 LALQRDL 4843>XP_005267748 Length = 1535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALRRDL 9 ALRRDL Sbjct: 798 ALRRDL 803>XP_006718884 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LALRRD 8 LALRRD Sbjct: 45 LALRRD 50>XP_006718882 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LALRRD 8 LALRRD Sbjct: 45 LALRRD 50>XP_006718879 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LALRRD 8 LALRRD Sbjct: 45 LALRRD 50>XP_006717146 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALRRDL 9 ALRRDL Sbjct: 144 ALRRDL 149>XP_005266132 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALRRDL 9 ALRRDL Sbjct: 144 ALRRDL 149>XP_006717095 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELALRRDL 9 ++ALR+DL Sbjct: 698 KIALRKDL 705>XP_006717094 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELALRRDL 9 ++ALR+DL Sbjct: 867 KIALRKDL 874>XP_005251923 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELALRRDL 9 ++ALR+DL Sbjct: 867 KIALRKDL 874>XP_005264316 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ELALRRDL 9 ELAL +DL Sbjct: 608 ELALEQDL 615>XP_005270516 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VELALRRDL 9 +ELA+ RD+ Sbjct: 157 LELAVNRDI 165>NP_114062 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 VEL LR+ L Sbjct: 192 VELVLRKSL 200>NP_061734 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VELALRRDL 9 VEL LR+ L Sbjct: 192 VELVLRKSL 200Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.150 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 381,936 Number of extensions: 562 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |