Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1935 XP_005262424 18 1935 NP_001093321 17 2528 NP_001038945 17 2528 NP_071900 16 5631 XP_006714967 16 5631 XP_006714966 16 5631 XP_006714964 16 5631 XP_005266016 16 5631 NP_001273988 16 7355 NP_055867 16 7355 NP_000370 16 7355 NP_055093 16 7355 NP_001153566 16 7355 NP_060943 16 7355 NP_001271203 16 7355 NP_065811 16 7355 NP_877497 16 7355 XP_006723005 16 7355 XP_005269612 16 7355 XP_006715736 16 7355 XP_006715735 16 7355 XP_005249722 16 7355 XP_006715734 16 7355 XP_006715733 16 7355 XP_006714203 16 7355 XP_006712712 16 7355 XP_006712711 16 7355 XP_006712710 16 7355 XP_006712709 16 7355 NP_001269316 15 9605 NP_005887 15 9605 NP_001269315 15 9605 NP_056153 15 9605 XP_006723795 15 9605 XP_006723794 15 9605 XP_006723793 15 9605 XP_006723792 15 9605 XP_006723791 15 9605 XP_006723790 15 9605>NP_722576 Length = 3080 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VEETSTNAL 9 VEETST AL Sbjct: 1177 VEETSTYAL 1185>XP_005262424 Length = 2875 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VEETSTNAL 9 VEETST AL Sbjct: 972 VEETSTYAL 980>NP_001093321 Length = 474 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 ETSTNAL 9 ETSTNAL Sbjct: 388 ETSTNAL 394>NP_001038945 Length = 474 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 ETSTNAL 9 ETSTNAL Sbjct: 388 ETSTNAL 394>NP_071900 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EETSTNA 8 EET TNA Sbjct: 185 EETQTNA 191>XP_006714967 Length = 1327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EETSTNA 8 EET TNA Sbjct: 185 EETQTNA 191>XP_006714966 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EETSTNA 8 EET TNA Sbjct: 185 EETQTNA 191>XP_006714964 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EETSTNA 8 EET TNA Sbjct: 185 EETQTNA 191>XP_005266016 Length = 2696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EETSTNA 8 EET TNA Sbjct: 185 EETQTNA 191>NP_001273988 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1563 VEETSTFGL 1571>NP_055867 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1597 VEETSTFGL 1605>NP_000370 Length = 1333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 + ETSTN + Sbjct: 1064 ISETSTNTV 1072>NP_055093 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEETSTNAL 9 ++ETS NAL Sbjct: 125 LKETSENAL 133>NP_001153566 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEE TNA+ Sbjct: 21 VEEEHTNAI 29>NP_060943 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEE TNA+ Sbjct: 44 VEEEHTNAI 52>NP_001271203 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ETSTNAL 9 ETSTN L Sbjct: 736 ETSTNCL 742>NP_065811 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1563 VEETSTFGL 1571>NP_877497 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ETSTNAL 9 ETSTN L Sbjct: 732 ETSTNCL 738>XP_006723005 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VEETSTN 7 VEE STN Sbjct: 212 VEENSTN 218>XP_005269612 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ETSTNAL 9 ETSTN L Sbjct: 625 ETSTNCL 631>XP_006715736 Length = 1573 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1564 VEETSTFGL 1572>XP_006715735 Length = 1606 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1597 VEETSTFGL 1605>XP_005249722 Length = 1607 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1598 VEETSTFGL 1606>XP_006715734 Length = 1607 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1598 VEETSTFGL 1606>XP_006715733 Length = 1608 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1599 VEETSTFGL 1607>XP_006714203 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEETSTNAL 9 ++ETS NAL Sbjct: 125 LKETSENAL 133>XP_006712712 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1405 VEETSTFGL 1413>XP_006712711 Length = 1448 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1439 VEETSTFGL 1447>XP_006712710 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1519 VEETSTFGL 1527>XP_006712709 Length = 1579 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VEETSTNAL 9 VEETST L Sbjct: 1570 VEETSTFGL 1578>NP_001269316 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EETSTNAL 9 +ETSTN + Sbjct: 323 QETSTNPI 330>NP_005887 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EETSTNAL 9 +ETSTN + Sbjct: 323 QETSTNPI 330>NP_001269315 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EETSTNAL 9 +ETSTN + Sbjct: 323 QETSTNPI 330>NP_056153 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 127 LDETSSNA 134>XP_006723795 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 117 LDETSSNA 124>XP_006723794 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 127 LDETSSNA 134>XP_006723793 Length = 1513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 99 LDETSSNA 106>XP_006723792 Length = 1513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 99 LDETSSNA 106>XP_006723791 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 117 LDETSSNA 124>XP_006723790 Length = 1540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VEETSTNA 8 ++ETS+NA Sbjct: 126 LDETSSNA 133Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.284 0.102 0.226 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,524 Number of extensions: 467 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |