Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002515 19 665 NP_004976 18 1135 NP_203524 18 1135 XP_006719132 18 1135 NP_056271 18 1482 NP_055938 18 1482 XP_005264780 18 1482 XP_006713127 18 1482 XP_006713126 18 1482 XP_005264779 18 1482 XP_005264778 18 1482 XP_005264777 18 1482 NP_003144 16 5631 NP_001171549 16 5631 NP_001171550 16 5631 NP_003027 16 5631 NP_001171551 16 5631 NP_001171552 16 5631 XP_006719638 16 5631 XP_006719637 16 5631 XP_006719636 16 5631 XP_005244833 16 5631 XP_005244832 16 5631 NP_004154 16 7355 NP_542166 16 7355 NP_056357 16 7355 XP_006722581 16 7355 XP_005266791 16 7355 XP_005266790 16 7355 NP_699207 16 7355 NP_065853 15 9605 NP_006377 15 9605 NP_001271230 15 9605 NP_001091974 15 9605 NP_001271231 15 9605 NP_061155 15 9605 NP_006378 15 9605 XP_005271684 15 9605 XP_006715810 15 9605 XP_006715809 15 9605>NP_002515 Length = 189 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDTKQAREL 9 VDTKQA EL Sbjct: 125 VDTKQAHEL 133>NP_004976 Length = 188 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDTKQA++L Sbjct: 125 VDTKQAQDL 133>NP_203524 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDTKQA++L Sbjct: 125 VDTKQAQDL 133>XP_006719132 Length = 189 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDTKQA++L Sbjct: 125 VDTKQAQDL 133>NP_056271 Length = 580 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VD+K+AREL Sbjct: 275 VDSKRAREL 283>NP_055938 Length = 1034 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 634 VDTRQSREM 642>XP_005264780 Length = 686 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 286 VDTRQSREM 294>XP_006713127 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 345 VDTRQSREM 353>XP_006713126 Length = 980 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 580 VDTRQSREM 588>XP_005264779 Length = 989 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 589 VDTRQSREM 597>XP_005264778 Length = 1001 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 601 VDTRQSREM 609>XP_005264777 Length = 1003 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VDTKQAREL 9 VDT+Q+RE+ Sbjct: 603 VDTRQSREM 611>NP_003144 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 316 VTEKQAREL 324>NP_001171549 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 316 VTEKQAREL 324>NP_001171550 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 316 VTEKQAREL 324>NP_003027 Length = 728 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VDTKQARE 8 +DTK+A+E Sbjct: 553 LDTKEAKE 560>NP_001171551 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 206 VTEKQAREL 214>NP_001171552 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 206 VTEKQAREL 214>XP_006719638 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 316 VTEKQAREL 324>XP_006719637 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 316 VTEKQAREL 324>XP_006719636 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAREL 9 V KQAREL Sbjct: 316 VTEKQAREL 324>XP_005244833 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VDTKQARE 8 +DTK+A+E Sbjct: 265 LDTKEAKE 272>XP_005244832 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VDTKQARE 8 +DTK+A+E Sbjct: 555 LDTKEAKE 562>NP_004154 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDTKQAREL 9 V+ +QAREL Sbjct: 143 VNERQAREL 151>NP_542166 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTKQARE 8 DTK+A+E Sbjct: 499 DTKEAKE 505>NP_056357 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTKQARE 8 DTK+A+E Sbjct: 499 DTKEAKE 505>XP_006722581 Length = 182 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDTKQAREL 9 V+ +QAREL Sbjct: 143 VNERQAREL 151>XP_005266791 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDTKQAREL 9 V+ +QAREL Sbjct: 143 VNERQAREL 151>XP_005266790 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDTKQAREL 9 V+ +QAREL Sbjct: 143 VNERQAREL 151>NP_699207 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TKQARE 8 TKQARE Sbjct: 481 TKQARE 486>NP_065853 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTKQARE 8 DTK++RE Sbjct: 685 DTKKSRE 691>NP_006377 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQAREL 9 KQAREL Sbjct: 528 KQAREL 533>NP_001271230 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTKQAREL 9 DTK+ R+L Sbjct: 1053 DTKEERDL 1060>NP_001091974 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQAREL 9 KQAREL Sbjct: 528 KQAREL 533>NP_001271231 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTKQAREL 9 DTK+ R+L Sbjct: 1052 DTKEERDL 1059>NP_061155 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTKQAREL 9 DTK+ R+L Sbjct: 1090 DTKEERDL 1097>NP_006378 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQAREL 9 KQAREL Sbjct: 228 KQAREL 233>XP_005271684 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTKQARE 8 DTK++RE Sbjct: 685 DTKKSRE 691>XP_006715810 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTKQAREL 9 DTK+ R+L Sbjct: 1071 DTKEERDL 1078>XP_006715809 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DTKQAREL 9 DTK+ R+L Sbjct: 1108 DTKEERDL 1115Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.122 0.297 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 437,306 Number of extensions: 856 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |