Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002515 21 229 NP_001159635 17 2528 NP_001159632 17 2528 NP_001159634 17 2528 NP_001159633 17 2528 NP_055399 17 2528 XP_006716110 17 2528 XP_005250542 17 2528 XP_006716109 17 2528 NP_060120 17 2528 NP_004976 17 3301 NP_203524 17 3301 XP_006719132 17 3301 NP_060626 16 5631 NP_056193 16 5631 NP_037407 16 5631 NP_001243112 16 5631 NP_001243111 16 5631 XP_006721247 16 5631 XP_006721246 16 5631 XP_006721245 16 5631 XP_006721244 16 5631 NP_078817 16 7355 XP_006721506 16 7355 XP_005256500 16 7355 XP_006721505 16 7355 XP_006721504 16 7355 XP_006718032 16 7355 NP_998762 16 7355 NP_597677 15 9605 NP_055313 15 9605 NP_056199 15 9605 NP_003109 15 9605 NP_110394 15 9605 NP_001276834 15 9605 NP_055154 15 9605 NP_653267 15 9605 NP_006536 15 9605 NP_002283 15 9605 NP_065961 15 9605 NP_001158137 15 9605 XP_005252305 15 9605 XP_005252303 15 9605 XP_006717357 15 9605 XP_005252304 15 9605 XP_005252302 15 9605 XP_005252301 15 9605 XP_005252300 15 9605 XP_006717159 15 9605 XP_006716135 15 9605 XP_006716134 15 9605 XP_005248340 15 9605 XP_005248339 15 9605 XP_005248337 15 9605 XP_006714531 15 9605 XP_006714530 15 9605 XP_005247421 15 9605 XP_005265184 15 9605 XP_006713000 15 9605 XP_005264865 15 9605 XP_005264863 15 9605>NP_002515 Length = 189 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VDTKQAHKL 9 VDTKQAH+L Sbjct: 125 VDTKQAHEL 133>NP_001159635 Length = 1090 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>NP_001159632 Length = 1374 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>NP_001159634 Length = 1253 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>NP_001159633 Length = 1296 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>NP_055399 Length = 468 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTKQAHKL 9 D K+AHKL Sbjct: 367 DKKEAHKL 374>XP_006716110 Length = 1141 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>XP_005250542 Length = 1357 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>XP_006716109 Length = 1365 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>NP_060120 Length = 1098 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDTKQAHK 8 VDT+ AHK Sbjct: 266 VDTEDAHK 273>NP_004976 Length = 188 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAHKL 9 VDTKQA L Sbjct: 125 VDTKQAQDL 133>NP_203524 Length = 189 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAHKL 9 VDTKQA L Sbjct: 125 VDTKQAQDL 133>XP_006719132 Length = 189 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VDTKQAHKL 9 VDTKQA L Sbjct: 125 VDTKQAQDL 133>NP_060626 Length = 4363 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VDTKQAHKL 9 +D K +HKL Sbjct: 3380 LDNKSSHKL 3388>NP_056193 Length = 4388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VDTKQAHKL 9 +D K +HKL Sbjct: 3405 LDNKSSHKL 3413>NP_037407 Length = 2663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 1061 DTKEKHK 1067>NP_001243112 Length = 2663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 1061 DTKEKHK 1067>NP_001243111 Length = 2663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 1061 DTKEKHK 1067>XP_006721247 Length = 2564 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 962 DTKEKHK 968>XP_006721246 Length = 2620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 1018 DTKEKHK 1024>XP_006721245 Length = 2629 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 1027 DTKEKHK 1033>XP_006721244 Length = 2629 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DTKQAHK 8 DTK+ HK Sbjct: 1027 DTKEKHK 1033>NP_078817 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 DTK H+L Sbjct: 381 DTKDEHRL 388>XP_006721506 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKQAHKL 9 TKQAH++ Sbjct: 217 TKQAHEV 223>XP_005256500 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKQAHKL 9 TKQAH++ Sbjct: 265 TKQAHEV 271>XP_006721505 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKQAHKL 9 TKQAH++ Sbjct: 299 TKQAHEV 305>XP_006721504 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKQAHKL 9 TKQAH++ Sbjct: 299 TKQAHEV 305>XP_006718032 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 DTK H+L Sbjct: 381 DTKDEHRL 388>NP_998762 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKQAHKL 9 TKQAH++ Sbjct: 299 TKQAHEV 305>NP_597677 Length = 2804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 928 VDTNKAH 934>NP_055313 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 DTKQAHK 8 D KQ HK Sbjct: 198 DVKQQHK 204>NP_056199 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 928 VDTNKAH 934>NP_003109 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TKQAHKL 9 TK+ HKL Sbjct: 135 TKKGHKL 141>NP_110394 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>NP_001276834 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDTKQAHKL 9 V+T +AH+L Sbjct: 209 VETLEAHQL 217>NP_055154 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDTKQAHKL 9 V+T +AH+L Sbjct: 209 VETLEAHQL 217>NP_653267 Length = 4753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VDTKQAHK 8 + KQAHK Sbjct: 3016 IGDKQAHK 3023>NP_006536 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TKQAHK 8 TKQ HK Sbjct: 269 TKQGHK 274>NP_002283 Length = 1798 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VDTKQAHK 8 +DT Q H+ Sbjct: 1150 IDTPQCHR 1157>NP_065961 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DTKQAHKL 9 DTK+ H++ Sbjct: 1557 DTKERHRV 1564>NP_001158137 Length = 1950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DTKQAHKL 9 DTK+ H++ Sbjct: 1557 DTKERHRV 1564>XP_005252305 Length = 1407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1394 DLRQAHSL 1401>XP_005252303 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>XP_006717357 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>XP_005252304 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>XP_005252302 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>XP_005252301 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>XP_005252300 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DTKQAHKL 9 D +QAH L Sbjct: 1426 DLRQAHSL 1433>XP_006717159 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 DTKQAH 7 D KQAH Sbjct: 1580 DAKQAH 1585>XP_006716135 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DTKQAHKL 9 DTK+ H++ Sbjct: 341 DTKERHRV 348>XP_006716134 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DTKQAHKL 9 DTK+ H++ Sbjct: 1454 DTKERHRV 1461>XP_005248340 Length = 2265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 389 VDTNKAH 395>XP_005248339 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 708 VDTNKAH 714>XP_005248337 Length = 2698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 928 VDTNKAH 934>XP_006714531 Length = 2738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 928 VDTNKAH 934>XP_006714530 Length = 2755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDTKQAH 7 VDT +AH Sbjct: 928 VDTNKAH 934>XP_005247421 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 DTKQAHK 8 D KQ HK Sbjct: 198 DVKQQHK 204>XP_005265184 Length = 1798 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VDTKQAHK 8 +DT Q H+ Sbjct: 1150 IDTPQCHR 1157>XP_006713000 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TKQAHK 8 TKQ HK Sbjct: 149 TKQGHK 154>XP_005264865 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TKQAHK 8 TKQ HK Sbjct: 149 TKQGHK 154>XP_005264863 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 TKQAHK 8 TKQ HK Sbjct: 210 TKQGHK 215Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.122 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 589,583 Number of extensions: 825 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |