Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1135 NP_001075109 18 1135 NP_065820 16 5631 NP_065920 16 5631 NP_775841 16 5631 XP_005247327 16 5631 XP_005247326 16 5631 XP_006713625 16 5631 XP_005247324 16 5631 XP_006713624 16 5631 XP_005247323 16 5631 XP_005247322 16 5631 NP_000247 16 7355 NP_919442 16 7355 NP_588616 16 7355 NP_001137160 16 7355 XP_005259651 16 7355 XP_005254204 16 7355 XP_005254202 16 7355 XP_005254201 16 7355 XP_006718301 16 7355 NP_001263256 15 9605 NP_001263255 15 9605 NP_653186 15 9605 NP_945185 15 9605 NP_001136175 15 9605 NP_001136176 15 9605 NP_001138820 15 9605 NP_078887 15 9605 NP_079049 15 9605 NP_001263314 15 9605 NP_001018099 15 9605 NP_115544 15 9605 XP_006721155 15 9605 XP_005254720 15 9605 XP_005254719 15 9605 XP_005254718 15 9605 XP_006718494 15 9605 XP_005273799 15 9605 XP_006718493 15 9605>NP_008835 Length = 4128 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDRSLFTLL 9 VDRSL TLL Sbjct: 1820 VDRSLLTLL 1828>NP_001075109 Length = 4097 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDRSLFTLL 9 VDRSL TLL Sbjct: 1820 VDRSLLTLL 1828>NP_065820 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDRSLFT 7 +DRSL+T Sbjct: 1301 IDRSLYT 1307>NP_065920 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRSLFTLL 9 +D+SL TL+ Sbjct: 631 IDKSLLTLI 639>NP_775841 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 329 DRSVFTAL 336>XP_005247327 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 168 DRSVFTAL 175>XP_005247326 Length = 409 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 329 DRSVFTAL 336>XP_006713625 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 329 DRSVFTAL 336>XP_005247324 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 323 DRSVFTAL 330>XP_006713624 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 326 DRSVFTAL 333>XP_005247323 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 329 DRSVFTAL 336>XP_005247322 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRSLFTLL 9 DRS+FT L Sbjct: 329 DRSVFTAL 336>NP_000247 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DRSLFTL 8 DRS+FT+ Sbjct: 732 DRSIFTV 738>NP_919442 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDRSLFTL 8 VD+ LFTL Sbjct: 68 VDQHLFTL 75>NP_588616 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 RSL+TLL Sbjct: 948 RSLYTLL 954>NP_001137160 Length = 1054 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 RSL+TLL Sbjct: 1031 RSLYTLL 1037>XP_005259651 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDRSLFTL 8 VD+ LFTL Sbjct: 68 VDQHLFTL 75>XP_005254204 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 RSL+TLL Sbjct: 948 RSLYTLL 954>XP_005254202 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 RSL+TLL Sbjct: 948 RSLYTLL 954>XP_005254201 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 RSL+TLL Sbjct: 1014 RSLYTLL 1020>XP_006718301 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DRSLFTL 8 DRS+FT+ Sbjct: 726 DRSIFTV 732>NP_001263256 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 123 DRSIFT 128>NP_001263255 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 123 DRSIFT 128>NP_653186 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 123 DRSIFT 128>NP_945185 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDRSLFT 7 +DRS+FT Sbjct: 92 LDRSVFT 98>NP_001136175 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDRSLFT 7 +DRS+FT Sbjct: 62 LDRSVFT 68>NP_001136176 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDRSLFT 7 +DRS+FT Sbjct: 62 LDRSVFT 68>NP_001138820 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDRSLFTLL 9 V+RS+ TLL Sbjct: 79 VERSVVTLL 87>NP_078887 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 +SLFTLL Sbjct: 285 QSLFTLL 291>NP_079049 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDRSLFTLL 9 V+RS+ TLL Sbjct: 41 VERSVVTLL 49>NP_001263314 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 +SLFTLL Sbjct: 285 QSLFTLL 291>NP_001018099 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 +SLFTLL Sbjct: 148 QSLFTLL 154>NP_115544 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 333 DRSIFT 338>XP_006721155 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDRSLFTLL 9 V+RS+ TLL Sbjct: 52 VERSVVTLL 60>XP_005254720 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 +SLFTLL Sbjct: 285 QSLFTLL 291>XP_005254719 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 +SLFTLL Sbjct: 148 QSLFTLL 154>XP_005254718 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSLFTLL 9 +SLFTLL Sbjct: 285 QSLFTLL 291>XP_006718494 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 88 DRSIFT 93>XP_005273799 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 123 DRSIFT 128>XP_006718493 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DRSLFT 7 DRS+FT Sbjct: 123 DRSIFT 128Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.152 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,558 Number of extensions: 528 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |