Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 20 299 XP_005266703 20 299 NP_004228 18 1135 XP_005248445 18 1135 NP_002635 17 2528 XP_005273220 17 2528 NP_003255 17 4312 NP_001025051 17 4312 NP_001018049 17 4312 XP_005252608 17 4312 XP_006717553 17 4312 XP_005263250 17 4312 XP_005263252 17 4312 XP_005263253 17 4312 XP_005263254 17 4312 XP_005263251 17 4312 NP_002372 16 5631 XP_006712581 16 7355 XP_005246132 16 7355 NP_001073973 16 7355 NP_001367 15 9605 NP_002308 15 9605 NP_001171573 15 9605 NP_001269810 15 9605 NP_001093587 15 9605 NP_055492 15 9605 NP_000866 15 9605 NP_066957 15 9605 NP_001092284 15 9605 NP_001399 15 9605 NP_055097 15 9605 XP_006724959 15 9605 XP_005254954 15 9605 XP_005254953 15 9605 XP_006720550 15 9605 XP_006720549 15 9605 XP_006718334 15 9605 XP_005251869 15 9605 XP_006716762 15 9605 XP_006716758 15 9605 XP_006716757 15 9605 XP_006716756 15 9605 XP_005251165 15 9605 XP_005251164 15 9605 XP_005251163 15 9605 XP_006716755 15 9605 XP_006716754 15 9605 XP_006716753 15 9605 XP_006710481 15 9605 XP_006710468 15 9605 XP_005270637 15 9605 NP_001276 15 9605>NP_443179 Length = 2170 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 VDRAD RSY Sbjct: 1114 VDRADFRSY 1122>XP_005266703 Length = 1501 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 VDRAD RSY Sbjct: 445 VDRADFRSY 453>NP_004228 Length = 432 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 VDRAD++ Y Sbjct: 310 VDRADIKQY 318>XP_005248445 Length = 417 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 VDRAD++ Y Sbjct: 295 VDRADIKQY 303>NP_002635 Length = 764 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 VDR +RSY Sbjct: 669 VDRVSIRSY 677>XP_005273220 Length = 773 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 VDR +RSY Sbjct: 669 VDRVSIRSY 677>NP_003255 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 +D +DL+SY Sbjct: 181 IDASDLQSY 189>NP_001025051 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRADLRSY 9 D ADLRS+ Sbjct: 291 DHADLRSH 298>NP_001018049 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRADLRSY 9 D ADLRS+ Sbjct: 291 DHADLRSH 298>XP_005252608 Length = 642 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRADLRSY 9 D ADLRS+ Sbjct: 39 DHADLRSH 46>XP_006717553 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DRADLRSY 9 D ADLRS+ Sbjct: 122 DHADLRSH 129>XP_005263250 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 +D +DL+SY Sbjct: 181 IDASDLQSY 189>XP_005263252 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 +D +DL+SY Sbjct: 181 IDASDLQSY 189>XP_005263253 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 +D +DL+SY Sbjct: 181 IDASDLQSY 189>XP_005263254 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 +D +DL+SY Sbjct: 181 IDASDLQSY 189>XP_005263251 Length = 784 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 +D +DL+SY Sbjct: 181 IDASDLQSY 189>NP_002372 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VDRADLRS 8 VDRAD+ S Sbjct: 222 VDRADMAS 229>XP_006712581 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 V ADLRS+ Sbjct: 837 VSEADLRSH 845>XP_005246132 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 V ADLRS+ Sbjct: 837 VSEADLRSH 845>NP_001073973 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 V ADLRS+ Sbjct: 842 VSEADLRSH 850>NP_001367 Length = 4646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 VD+ +LR Y Sbjct: 2884 VDQEELRDY 2892>NP_002308 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 RAD+R Y Sbjct: 251 RADVRDY 257>NP_001171573 Length = 187 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 RAD+R Y Sbjct: 21 RADVRDY 27>NP_001269810 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 251 IDRPDLR 257>NP_001093587 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 443 IDRPDLR 449>NP_055492 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 251 IDRPDLR 257>NP_000866 Length = 1367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DL+SY Sbjct: 1084 RGDLKSY 1090>NP_066957 Length = 153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DLR+Y Sbjct: 50 RVDLRNY 56>NP_001092284 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VDRADL 6 +DRADL Sbjct: 215 IDRADL 220>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 VDR ++ SY Sbjct: 355 VDREEVESY 363>NP_055097 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 ++RA+ RSY Sbjct: 140 LERAERRSY 148>XP_006724959 Length = 153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DLR+Y Sbjct: 50 RVDLRNY 56>XP_005254954 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DL+SY Sbjct: 963 RGDLKSY 969>XP_005254953 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DL+SY Sbjct: 1083 RGDLKSY 1089>XP_006720550 Length = 1373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DL+SY Sbjct: 1090 RGDLKSY 1096>XP_006720549 Length = 1374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DL+SY Sbjct: 1091 RGDLKSY 1097>XP_006718334 Length = 123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RADLRSY 9 R DLR+Y Sbjct: 50 RVDLRNY 56>XP_005251869 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDRADLRSY 9 ++RA+ RSY Sbjct: 30 LERAERRSY 38>XP_006716762 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 487 IDRPDLR 493>XP_006716758 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 487 IDRPDLR 493>XP_006716757 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 251 IDRPDLR 257>XP_006716756 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 487 IDRPDLR 493>XP_005251165 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 483 IDRPDLR 489>XP_005251164 Length = 1552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 443 IDRPDLR 449>XP_005251163 Length = 1574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 443 IDRPDLR 449>XP_006716755 Length = 1634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 487 IDRPDLR 493>XP_006716754 Length = 1655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 487 IDRPDLR 493>XP_006716753 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VDRADLR 7 +DR DLR Sbjct: 487 IDRPDLR 493>XP_006710481 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RADLRS 8 RADLRS Sbjct: 463 RADLRS 468>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 VDR ++ SY Sbjct: 355 VDREEVESY 363>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VDRADLRSY 9 VDR ++ SY Sbjct: 355 VDREEVESY 363>NP_001276 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDRADLRS 8 VD+ DL+S Sbjct: 847 VDKVDLKS 854Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.138 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,788 Number of extensions: 708 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |