Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 390 XP_005251512 20 390 NP_003945 17 4312 NP_001128302 16 5631 NP_060121 16 5631 NP_001128303 16 5631 NP_001128304 16 5631 XP_005267096 16 5631 XP_006715570 16 5631 NP_001018066 16 7355 NP_003374 16 7355 XP_006716928 16 7355 XP_006716927 16 7355 NP_001268669 15 9605 NP_114113 15 9605 NP_079411 15 9605 NP_001268668 15 9605 NP_004997 15 9605 NP_113652 15 9605 NP_001186913 15 9605 XP_006722614 15 9605 XP_005258412 15 9605 XP_005258411 15 9605 XP_005258409 15 9605 XP_005258408 15 9605 XP_006722613 15 9605 XP_005258407 15 9605 XP_005258406 15 9605 XP_005258405 15 9605 XP_005258404 15 9605 XP_005258403 15 9605 XP_005268179 15 9605 XP_005268177 15 9605 XP_006720334 15 9605 XP_006720333 15 9605 XP_006720332 15 9605 XP_005268175 15 9605 XP_005268171 15 9605 XP_006720331 15 9605 XP_006720330 15 9605 XP_006720329 15 9605 XP_005268172 15 9605 XP_006720328 15 9605 NP_001186911 15 9605 NP_001186910 15 9605 NP_001186912 15 9605>NP_004963 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VDQIRNNMA 9 VDQIR+NMA Sbjct: 1123 VDQIRDNMA 1131>XP_005251512 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VDQIRNNMA 9 VDQIR+NMA Sbjct: 1123 VDQIRDNMA 1131>NP_003945 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 +DQI NN+A Sbjct: 114 LDQIPNNVA 122>NP_001128302 Length = 1196 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDQIRNN 7 VD+I+NN Sbjct: 455 VDEIKNN 461>NP_060121 Length = 1196 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDQIRNN 7 VD+I+NN Sbjct: 455 VDEIKNN 461>NP_001128303 Length = 1196 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDQIRNN 7 VD+I+NN Sbjct: 455 VDEIKNN 461>NP_001128304 Length = 1053 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDQIRNN 7 VD+I+NN Sbjct: 455 VDEIKNN 461>XP_005267096 Length = 1168 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDQIRNN 7 VD+I+NN Sbjct: 455 VDEIKNN 461>XP_006715570 Length = 1179 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VDQIRNN 7 VD+I+NN Sbjct: 455 VDEIKNN 461>NP_001018066 Length = 845 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 V+Q+RN +A Sbjct: 465 VEQLRNTVA 473>NP_003374 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 V+Q+RN +A Sbjct: 465 VEQLRNTVA 473>XP_006716928 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 V+Q+RN +A Sbjct: 470 VEQLRNTVA 478>XP_006716927 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 V+Q+RN +A Sbjct: 470 VEQLRNTVA 478>NP_001268669 Length = 1622 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1266 IDQLENN 1272>NP_114113 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VDQIRNNM 8 +DQ+++NM Sbjct: 391 LDQLKDNM 398>NP_079411 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1091 IDQLENN 1097>NP_001268668 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1074 IDQLENN 1080>NP_004997 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VDQIRNNM 8 +DQ+RN + Sbjct: 639 LDQVRNRL 646>NP_113652 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>NP_001186913 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VDQIRNNM 8 +DQ+RN + Sbjct: 653 LDQVRNRL 660>XP_006722614 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1241 IDQLENN 1247>XP_005258412 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1053 IDQLENN 1059>XP_005258411 Length = 1409 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1053 IDQLENN 1059>XP_005258409 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1074 IDQLENN 1080>XP_005258408 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1091 IDQLENN 1097>XP_006722613 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1167 IDQLENN 1173>XP_005258407 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1266 IDQLENN 1272>XP_005258406 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1203 IDQLENN 1209>XP_005258405 Length = 1597 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1241 IDQLENN 1247>XP_005258404 Length = 1605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1249 IDQLENN 1255>XP_005258403 Length = 1614 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VDQIRNN 7 +DQ+ NN Sbjct: 1266 IDQLENN 1272>XP_005268179 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_005268177 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720334 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720333 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720332 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_005268175 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_005268171 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720331 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720330 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720329 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_005268172 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>XP_006720328 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDQIRNNMA 9 ++QIRN +A Sbjct: 30 LEQIRNRVA 38>NP_001186911 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VDQIRNNM 8 +DQ+RN + Sbjct: 528 LDQVRNRL 535>NP_001186910 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VDQIRNNM 8 +DQ+RN + Sbjct: 603 LDQVRNRL 610>NP_001186912 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VDQIRNNM 8 +DQ+RN + Sbjct: 582 LDQVRNRL 589Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.128 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 462,996 Number of extensions: 892 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |