Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 21 229 NP_004561 21 229 NP_001275703 21 229 XP_005253450 21 229 XP_006719151 21 229 NP_001005329 17 2528 NP_001004748 17 2528 XP_001718723 17 3301 NP_620161 17 4312 NP_740750 17 4312 NP_620386 17 4312 NP_620385 17 4312 NP_996879 17 4312 XP_006713555 17 4312 XP_006713554 17 4312 XP_006710494 17 4312 XP_006710492 17 4312 XP_006710491 17 4312 XP_006710490 17 4312 XP_006710489 17 4312 NP_002444 16 5631 NP_001005369 16 5631 NP_689562 16 5631 XP_005256920 16 5631 XP_006712087 16 5631 XP_005264392 16 5631 XP_006712086 16 5631 NP_001004749 16 5631 NP_057427 16 7355 NP_001241681 16 7355 NP_689955 16 7355 NP_071338 16 7355 XP_006716715 16 7355 NP_115785 15 9605 NP_877963 15 9605 NP_002651 15 9605 NP_005126 15 9605 NP_598408 15 9605 NP_001035959 15 9605 NP_001035962 15 9605 NP_001035960 15 9605 NP_001035961 15 9605 NP_055869 15 9605 NP_036553 15 9605 NP_060862 15 9605 NP_660154 15 9605 XP_005274666 15 9605 XP_005274659 15 9605 XP_005260495 15 9605 XP_006720856 15 9605 XP_006719360 15 9605 XP_005268797 15 9605 XP_005268796 15 9605 XP_005268795 15 9605 XP_005268794 15 9605 XP_005263172 15 9605 NP_612157 15 9605>NP_001275701 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 CVETKQIT 9 CVETKQIT Sbjct: 443 CVETKQIT 450>NP_004561 Length = 1445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 CVETKQIT 9 CVETKQIT Sbjct: 443 CVETKQIT 450>NP_001275703 Length = 1264 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 CVETKQIT 9 CVETKQIT Sbjct: 221 CVETKQIT 228>XP_005253450 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 CVETKQIT 9 CVETKQIT Sbjct: 443 CVETKQIT 450>XP_006719151 Length = 1486 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 CVETKQIT 9 CVETKQIT Sbjct: 443 CVETKQIT 450>NP_001005329 Length = 313 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CVETKQI 8 CV+TKQI Sbjct: 294 CVKTKQI 300>NP_001004748 Length = 313 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CVETKQI 8 CV+TKQI Sbjct: 294 CVKTKQI 300>XP_001718723 Length = 1091 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +CV T Q+T Sbjct: 167 ICVTTTQVT 175>NP_620161 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++ KQIT Sbjct: 50 LCMDEKQIT 58>NP_740750 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++ KQIT Sbjct: 27 LCMDEKQIT 35>NP_620386 Length = 165 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++ KQIT Sbjct: 27 LCMDEKQIT 35>NP_620385 Length = 188 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++ KQIT Sbjct: 50 LCMDEKQIT 58>NP_996879 Length = 2223 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C+E+KQ+ Sbjct: 1742 LCIESKQL 1749>XP_006713555 Length = 257 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++ KQIT Sbjct: 50 LCMDEKQIT 58>XP_006713554 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++ KQIT Sbjct: 50 LCMDEKQIT 58>XP_006710494 Length = 1152 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C+E+KQ+ Sbjct: 671 LCIESKQL 678>XP_006710492 Length = 1351 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C+E+KQ+ Sbjct: 870 LCIESKQL 877>XP_006710491 Length = 1496 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C+E+KQ+ Sbjct: 1015 LCIESKQL 1022>XP_006710490 Length = 2158 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C+E+KQ+ Sbjct: 1677 LCIESKQL 1684>XP_006710489 Length = 2185 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C+E+KQ+ Sbjct: 1704 LCIESKQL 1711>NP_002444 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VCVETKQI 8 VC E KQI Sbjct: 710 VCYEEKQI 717>NP_001005369 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VCVETKQI 8 VC E KQI Sbjct: 710 VCYEEKQI 717>NP_689562 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CVETKQ 7 C+ETKQ Sbjct: 262 CLETKQ 267>XP_005256920 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CVETKQIT 9 CV+ KQ+T Sbjct: 730 CVQQKQMT 737>XP_006712087 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VCVETKQI 8 VC E KQI Sbjct: 467 VCYEEKQI 474>XP_005264392 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VCVETKQI 8 VC E KQI Sbjct: 710 VCYEEKQI 717>XP_006712086 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VCVETKQI 8 VC E KQI Sbjct: 710 VCYEEKQI 717>NP_001004749 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CVETKQI 8 CV+T+QI Sbjct: 292 CVKTRQI 298>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C++T Q+T Sbjct: 721 MCLKTSQLT 729>NP_001241681 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CVETKQ 7 C+ET+Q Sbjct: 126 CIETRQ 131>NP_689955 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CVETKQI 8 C ET+Q+ Sbjct: 32 CAETRQV 38>NP_071338 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VCVETKQ 7 VCV T+Q Sbjct: 400 VCVNTRQ 406>XP_006716715 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 CVETKQ 7 C+ET+Q Sbjct: 126 CIETRQ 131>NP_115785 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CVETK 6 CVETK Sbjct: 549 CVETK 553>NP_877963 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 V +ET+QIT Sbjct: 53 VKLETRQIT 61>NP_002651 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 V +ET+QIT Sbjct: 53 VKLETRQIT 61>NP_005126 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 338 VCSKTKEI 345>NP_598408 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 389 VCSKTKEI 396>NP_001035959 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 330 VCSKTKEI 337>NP_001035962 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 374 VCSKTKEI 381>NP_001035960 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 330 VCSKTKEI 337>NP_001035961 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 380 VCSKTKEI 387>NP_055869 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +C++ Q+T Sbjct: 1213 ICLQVNQVT 1221>NP_036553 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 +C E+K+I+ Sbjct: 237 LCAESKEIS 245>NP_060862 Length = 2104 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CVETKQI 8 CV T+Q+ Sbjct: 2008 CVRTRQV 2014>NP_660154 Length = 130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ETKQIT 9 ETKQ+T Sbjct: 88 ETKQVT 93>XP_005274666 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CVETKQI 8 CV+ KQI Sbjct: 405 CVDQKQI 411>XP_005274659 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CVETKQI 8 CV+ KQI Sbjct: 837 CVDQKQI 843>XP_005260495 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VCVETKQIT 9 V +ET+QIT Sbjct: 53 VKLETRQIT 61>XP_006720856 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VCVETKQI 8 VC +TK+I Sbjct: 340 VCSKTKEI 347>XP_006719360 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +C++ Q+T Sbjct: 760 ICLQVNQVT 768>XP_005268797 Length = 1384 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +C++ Q+T Sbjct: 1213 ICLQVNQVT 1221>XP_005268796 Length = 1403 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +C++ Q+T Sbjct: 1152 ICLQVNQVT 1160>XP_005268795 Length = 1416 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +C++ Q+T Sbjct: 1165 ICLQVNQVT 1173>XP_005268794 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VCVETKQIT 9 +C++ Q+T Sbjct: 1213 ICLQVNQVT 1221>XP_005263172 Length = 2104 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CVETKQI 8 CV T+Q+ Sbjct: 2008 CVRTRQV 2014>NP_612157 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VCVETKQI 8 +C++TK+I Sbjct: 381 LCLKTKEI 388Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.127 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 552,957 Number of extensions: 704 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |