Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036342 17 3301 NP_001093149 17 3301 XP_005251870 17 3301 NP_000821 16 5631 NP_783300 16 5631 XP_003960784 16 5631 XP_005261001 16 5631 XP_005261000 16 5631 XP_005260999 16 5631 XP_006724054 16 5631 XP_938432 16 5631 XP_005275869 16 5631 NP_001124149 16 7355 NP_060193 16 7355 NP_001924 16 7355 NP_065784 16 7355 XP_005247723 16 7355 NP_001108225 15 9605 NP_001265067 15 9605 NP_001278327 15 9605 NP_001005751 15 9605 NP_001243210 15 9605 NP_001164015 15 9605 NP_689627 15 9605 NP_612490 15 9605 NP_001162578 15 9605 NP_072174 15 9605 NP_060520 15 9605 NP_057323 15 9605 NP_612642 15 9605 NP_001164014 15 9605 XP_005276344 15 9605 XP_005261428 15 9605 XP_005261427 15 9605 XP_005256732 15 9605 XP_006717895 15 9605 XP_005269865 15 9605 XP_006717894 15 9605 XP_005269864 15 9605 XP_005269863 15 9605 XP_005249984 15 9605 XP_006712785 15 9605 XP_005246883 15 9605 XP_005246882 15 9605 XP_006712784 15 9605 XP_005276056 15 9605 NP_001138526 15 9605 NP_001162577 15 9605 NP_056077 15 9605>NP_036342 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VASPRAS 9 VASPRAS Sbjct: 333 VASPRAS 339>NP_001093149 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VASPRAS 9 VASPRAS Sbjct: 333 VASPRAS 339>XP_005251870 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VASPRAS 9 VASPRAS Sbjct: 333 VASPRAS 339>NP_000821 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VA+AS RAS Sbjct: 331 VAIASHRAS 339>NP_783300 Length = 905 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VA+AS RAS Sbjct: 331 VAIASHRAS 339>XP_003960784 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VAVASPRA 8 VAVA+P+A Sbjct: 173 VAVAAPKA 180>XP_005261001 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VA+AS RAS Sbjct: 331 VAIASHRAS 339>XP_005261000 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VA+AS RAS Sbjct: 331 VAIASHRAS 339>XP_005260999 Length = 934 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VA+AS RAS Sbjct: 331 VAIASHRAS 339>XP_006724054 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VA+AS RAS Sbjct: 331 VAIASHRAS 339>XP_938432 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VAVASPRA 8 VAVA+P+A Sbjct: 173 VAVAAPKA 180>XP_005275869 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VAVASPRA 8 VAVA+P+A Sbjct: 173 VAVAAPKA 180>NP_001124149 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 A+A PRAS Sbjct: 47 ALAKPRAS 54>NP_060193 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 A A+PRAS Sbjct: 11 AAAAPRAS 18>NP_001924 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAVASPR 7 VAVA+PR Sbjct: 319 VAVATPR 325>NP_065784 Length = 1381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VASPRAS 9 +ASPRAS Sbjct: 1 MASPRAS 7>XP_005247723 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VASPRAS 9 +ASPRAS Sbjct: 1 MASPRAS 7>NP_001108225 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VAVA+P +S Sbjct: 627 VAVAAPASS 635>NP_001265067 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAVASPRAS 9 VAVA+P +S Sbjct: 445 VAVAAPASS 453>NP_001278327 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 495 AVASPEAT 502>NP_001005751 Length = 1341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 495 AVASPEAT 502>NP_001243210 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAVASPR 7 V VASPR Sbjct: 92 VVVASPR 98>NP_001164015 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAVASPRA 8 VAV PRA Sbjct: 26 VAVGKPRA 33>NP_689627 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VASPRAS 9 VA PRAS Sbjct: 164 VADPRAS 170>NP_612490 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 372 AVAGPRA 378>NP_001162578 Length = 1245 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 471 AVASPEAT 478>NP_072174 Length = 1735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 1033 AVAGPRA 1039>NP_060520 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAVASPRAS 9 VAVASP + Sbjct: 230 VAVASPHTT 238>NP_057323 Length = 3530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASPRAS 9 ASPRAS Sbjct: 760 ASPRAS 765>NP_612642 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAVASPRA 8 VAV PRA Sbjct: 26 VAVGKPRA 33>NP_001164014 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAVASPRA 8 VAV PRA Sbjct: 26 VAVGKPRA 33>XP_005276344 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASPRAS 9 ASPRAS Sbjct: 371 ASPRAS 376>XP_005261428 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 372 AVAGPRA 378>XP_005261427 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 372 AVAGPRA 378>XP_005256732 Length = 3531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASPRAS 9 ASPRAS Sbjct: 760 ASPRAS 765>XP_006717895 Length = 1297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 523 AVASPEAT 530>XP_005269865 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 547 AVASPEAT 554>XP_006717894 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 547 AVASPEAT 554>XP_005269864 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 547 AVASPEAT 554>XP_005269863 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 523 AVASPEAT 530>XP_005249984 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASPRAS 9 ASPRAS Sbjct: 371 ASPRAS 376>XP_006712785 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 650 AVAGPRA 656>XP_005246883 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 650 AVAGPRA 656>XP_005246882 Length = 1518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 816 AVAGPRA 822>XP_006712784 Length = 1784 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVASPRA 8 AVA PRA Sbjct: 1082 AVAGPRA 1088>XP_005276056 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ASPRAS 9 ASPRAS Sbjct: 371 ASPRAS 376>NP_001138526 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VASPRAS 9 VASP+AS Sbjct: 254 VASPQAS 260>NP_001162577 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 495 AVASPEAT 502>NP_056077 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVASPRAS 9 AVASP A+ Sbjct: 495 AVASPEAT 502Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.109 0.270 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 667,869 Number of extensions: 604 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |