Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 21 175 NP_002871 21 175 XP_005250103 21 175 XP_005250102 21 175 XP_005265416 21 175 XP_005265415 21 175 XP_005265414 21 175 XP_005265412 21 175 NP_001243125 20 390 NP_001645 20 390 XP_006724592 20 390 NP_005152 17 2528 NP_065805 17 4312 NP_001242940 17 4312 NP_001242939 17 4312 NP_056538 17 4312 NP_001242938 17 4312 NP_001242937 17 4312 NP_001242936 17 4312 NP_212133 17 4312 NP_940938 17 4312 NP_001138888 17 4312 XP_005259958 17 4312 XP_005259957 17 4312 XP_005259959 17 4312 XP_005259956 17 4312 XP_005259955 17 4312 XP_005250453 17 4312 XP_005247728 17 4312 XP_006713777 17 4312 NP_065831 16 5631 XP_005269436 16 5631 NP_001070665 16 7355 NP_001070664 16 7355 NP_058649 16 7355 NP_001070826 16 7355 NP_056078 16 7355 NP_001167587 16 7355 NP_932348 16 7355 NP_997069 16 7355 NP_001003745 16 7355 XP_005256402 16 7355 XP_006722342 16 7355 XP_005254315 16 7355 XP_005254314 16 7355 XP_006720509 16 7355 XP_005254313 16 7355 XP_005254312 16 7355 NP_940686 16 7355 NP_835462 16 7355 NP_001004460 16 7355 NP_060649 15 9605 NP_001273443 15 9605 NP_851997 15 9605 NP_000933 15 9605 NP_001772 15 9605 NP_001376 15 9605 XP_006719172 15 9605 XP_006719171 15 9605 XP_005253481 15 9605 XP_006716581 15 9605 XP_006716580 15 9605 XP_005250875 15 9605>NP_004324 Length = 766 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 597 LATVKSRWS 605>NP_002871 Length = 648 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 489 LATVKSRWS 497>XP_005250103 Length = 758 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 597 LATVKSRWS 605>XP_005250102 Length = 767 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 597 LATVKSRWS 605>XP_005265416 Length = 534 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 375 LATVKSRWS 383>XP_005265415 Length = 567 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 408 LATVKSRWS 416>XP_005265414 Length = 615 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 456 LATVKSRWS 464>XP_005265412 Length = 648 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVKSRWS Sbjct: 489 LATVKSRWS 497>NP_001243125 Length = 609 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVK+RWS Sbjct: 453 LATVKTRWS 461>NP_001645 Length = 606 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVK+RWS Sbjct: 450 LATVKTRWS 458>XP_006724592 Length = 611 Score = 20.0 bits (40), Expect = 390 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VATVKSRWS 9 +ATVK+RWS Sbjct: 455 LATVKTRWS 463>NP_005152 Length = 380 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VATVKSRWS 9 VATV S W+ Sbjct: 188 VATVSSEWA 196>NP_065805 Length = 1444 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVKSRWS 9 TVKS+W+ Sbjct: 960 TVKSQWT 966>NP_001242940 Length = 682 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 420 VGTVKMSWS 428>NP_001242939 Length = 682 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 420 VGTVKMSWS 428>NP_056538 Length = 782 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 520 VGTVKMSWS 528>NP_001242938 Length = 720 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 520 VGTVKMSWS 528>NP_001242937 Length = 782 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 520 VGTVKMSWS 528>NP_001242936 Length = 782 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 520 VGTVKMSWS 528>NP_212133 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>NP_940938 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>NP_001138888 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>XP_005259958 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>XP_005259957 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>XP_005259959 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>XP_005259956 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>XP_005259955 Length = 189 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 +ATV +RW Sbjct: 98 LATVNARW 105>XP_005250453 Length = 720 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VATVKSRWS 9 V TVK WS Sbjct: 520 VGTVKMSWS 528>XP_005247728 Length = 1413 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVKSRWS 9 TVKS+W+ Sbjct: 929 TVKSQWT 935>XP_006713777 Length = 1424 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TVKSRWS 9 TVKS+W+ Sbjct: 940 TVKSQWT 946>NP_065831 Length = 1392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 + VKSRW Sbjct: 724 SAVKSRW 730>XP_005269436 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VATVKSRWS 9 + T+K+ WS Sbjct: 156 ICTIKTDWS 164>NP_001070665 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VAT +S+W Sbjct: 648 VATNRSKW 655>NP_001070664 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VAT +S+W Sbjct: 454 VATNRSKW 461>NP_058649 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VAT +S+W Sbjct: 898 VATNRSKW 905>NP_001070826 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VAT +S+W Sbjct: 540 VATNRSKW 547>NP_056078 Length = 3036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>NP_001167587 Length = 3037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>NP_932348 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 +TVKS W Sbjct: 357 STVKSAW 363>NP_997069 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VATV++ W Sbjct: 156 VATVQTTW 163>NP_001003745 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VATV++ W Sbjct: 155 VATVQTTW 162>XP_005256402 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 +TVKS W Sbjct: 357 STVKSAW 363>XP_006722342 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 +TVKS W Sbjct: 368 STVKSAW 374>XP_005254315 Length = 2576 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_005254314 Length = 2605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_006720509 Length = 2646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_005254313 Length = 3057 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>XP_005254312 Length = 3058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 1226 VKSRW 1230>NP_940686 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 VKSRW 8 VKSRW Sbjct: 126 VKSRW 130>NP_835462 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VATV++ W Sbjct: 156 VATVQTTW 163>NP_001004460 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATVKSRW 8 VATV++ W Sbjct: 142 VATVQTTW 149>NP_060649 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1207 ATVPSQW 1213>NP_001273443 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1206 ATVPSQW 1212>NP_851997 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1215 ATVPSQW 1221>NP_000933 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VATVKSRW 8 + TVK+ W Sbjct: 154 ITTVKTAW 161>NP_001772 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VATVKSRWS 9 ++TVK W+ Sbjct: 99 ISTVKRSWT 107>NP_001376 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VATVKSR 7 VAT+KSR Sbjct: 497 VATLKSR 503>XP_006719172 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1207 ATVPSQW 1213>XP_006719171 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1207 ATVPSQW 1213>XP_005253481 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ATVKSRW 8 ATV S+W Sbjct: 1214 ATVPSQW 1220>XP_006716581 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VATVKSR 7 VAT+KSR Sbjct: 480 VATLKSR 486>XP_006716580 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VATVKSR 7 VAT+KSR Sbjct: 533 VATLKSR 539>XP_005250875 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VATVKSR 7 VAT+KSR Sbjct: 533 VATLKSR 539Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.112 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 508,970 Number of extensions: 447 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |