Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 19 869 XP_006713721 19 869 NP_001269356 18 1135 NP_001269355 18 1135 NP_002640 18 1135 XP_005250500 18 1135 NP_005017 17 2528 NP_002636 17 2528 XP_005253037 17 2528 XP_005253036 17 2528 XP_005253035 17 2528 XP_005253034 17 2528 XP_005245315 17 2528 XP_006711447 17 2528 XP_005245314 17 2528 XP_006710753 17 2528 XP_005263530 17 2528 XP_006710752 17 2528 XP_006710751 17 2528 XP_006710750 17 2528 XP_006710749 17 2528 NP_002637 17 2528 NP_001275701 17 3301 NP_004561 17 3301 NP_001275703 17 3301 XP_005253450 17 3301 XP_006719151 17 3301 NP_116207 16 5631 NP_005674 15 9605 NP_001161957 15 9605 NP_001161954 15 9605 NP_001161951 15 9605 NP_001161952 15 9605 NP_073749 15 9605 NP_001161950 15 9605 NP_002638 15 9605 NP_001107604 15 9605 NP_036537 15 9605 XP_006721734 15 9605 XP_005247009 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_005263494 15 9605 NP_001153879 15 9605 NP_612472 15 9605>NP_006209 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VATFILGI Sbjct: 906 VATFILGI 913>XP_006713721 Length = 1068 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VATFILGI Sbjct: 906 VATFILGI 913>NP_001269356 Length = 1102 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VATF+LGI Sbjct: 937 VATFVLGI 944>NP_001269355 Length = 1102 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VATF+LGI Sbjct: 937 VATFVLGI 944>NP_002640 Length = 1102 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VATF+LGI Sbjct: 937 VATFVLGI 944>XP_005250500 Length = 1102 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VATF+LGI Sbjct: 937 VATFVLGI 944>NP_005017 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 884 VATYVLGI 891>NP_002636 Length = 1686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1241 VATYVLGI 1248>XP_005253037 Length = 1306 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 861 VATYVLGI 868>XP_005253036 Length = 1686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1241 VATYVLGI 1248>XP_005253035 Length = 1686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1241 VATYVLGI 1248>XP_005253034 Length = 1686 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1241 VATYVLGI 1248>XP_005245315 Length = 1607 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1159 VATYVLGI 1166>XP_006711447 Length = 1634 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1186 VATYVLGI 1193>XP_005245314 Length = 1634 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1186 VATYVLGI 1193>XP_006710753 Length = 1015 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 855 VATYVLGI 862>XP_005263530 Length = 1043 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 883 VATYVLGI 890>XP_006710752 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 884 VATYVLGI 891>XP_006710751 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 884 VATYVLGI 891>XP_006710750 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 884 VATYVLGI 891>XP_006710749 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 884 VATYVLGI 891>NP_002637 Length = 1634 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VATFILGI 8 VAT++LGI Sbjct: 1186 VATYVLGI 1193>NP_001275701 Length = 1486 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 V TFILG+ Sbjct: 1065 VVTFILGV 1072>NP_004561 Length = 1445 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 V TFILG+ Sbjct: 1024 VVTFILGV 1031>NP_001275703 Length = 1264 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 V TFILG+ Sbjct: 843 VVTFILGV 850>XP_005253450 Length = 1486 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 V TFILG+ Sbjct: 1065 VVTFILGV 1072>XP_006719151 Length = 1486 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 V TFILG+ Sbjct: 1065 VVTFILGV 1072>NP_116207 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 VAT+ LGI Sbjct: 44 VATYFLGI 51>NP_005674 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 + TF+LG+ Sbjct: 28 IPTFVLGL 35>NP_001161957 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 +AT I+GI Sbjct: 330 IATMIMGI 337>NP_001161954 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 +AT I+GI Sbjct: 330 IATMIMGI 337>NP_001161951 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 +AT I+GI Sbjct: 330 IATMIMGI 337>NP_001161952 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 +AT I+GI Sbjct: 330 IATMIMGI 337>NP_073749 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 +AT I+GI Sbjct: 330 IATMIMGI 337>NP_001161950 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 +AT I+GI Sbjct: 330 IATMIMGI 337>NP_002638 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 V T+ILG+ Sbjct: 734 VITYILGV 741>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 930 VATFILIVK 938>NP_036537 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VATFILG 7 +ATF+LG Sbjct: 18 LATFLLG 24>XP_006721734 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 + TF+LGI Sbjct: 132 LGTFLLGI 139>XP_005247009 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 + TF+LG+ Sbjct: 28 IPTFVLGL 35>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 902 VATFILIVK 910>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 959 VATFILIVK 967>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 930 VATFILIVK 938>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 959 VATFILIVK 967>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 959 VATFILIVK 967>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VATFILGIR 9 VATFIL ++ Sbjct: 959 VATFILIVK 967>XP_005263494 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VATFILG 7 +ATF+LG Sbjct: 18 LATFLLG 24>NP_001153879 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 + TF+LGI Sbjct: 156 LGTFLLGI 163>NP_612472 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VATFILGI 8 + TF+LGI Sbjct: 203 LGTFLLGI 210Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.161 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 386,835 Number of extensions: 473 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |