Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 NP_060016 17 4312 NP_001036212 17 4312 NP_001036194 17 4312 NP_005239 17 4312 XP_006710515 17 4312 NP_000042 16 5631 NP_001073982 16 5631 NP_031392 16 5631 NP_001007268 16 5631 NP_001182570 16 5631 XP_006718908 16 5631 XP_005271621 16 5631 XP_006718907 16 5631 XP_006718906 16 5631 XP_005271619 16 5631 XP_005271618 16 5631 XP_005269338 16 5631 XP_005269337 16 5631 XP_005246452 16 5631 XP_006712432 16 5631 XP_005246450 16 5631 XP_005246449 16 5631 NP_996763 16 5631 NP_001267 16 7355 NP_004035 16 7355 NP_055637 16 7355 NP_001005850 16 7355 XP_005276733 16 7355 XP_005259517 16 7355 XP_005259440 16 7355 XP_005259439 16 7355 XP_006716981 16 7355 XP_006716980 16 7355 XP_005272572 16 7355 XP_005272573 16 7355 XP_005263436 16 7355 XP_005263435 16 7355 XP_006712608 16 7355 NP_149350 16 7355 NP_001128661 15 9605 XP_006712544 15 9605 XP_006712543 15 9605 XP_005246573 15 9605 XP_006712542 15 9605 XP_006712541 15 9605 NP_001128660 15 9605 NP_001128659 15 9605 NP_004495 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VASFAHVSN 9 V SFAHVSN Sbjct: 539 VVSFAHVSN 547>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VASFAHVSN 9 V SFAHVSN Sbjct: 605 VVSFAHVSN 613>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VASFAHVSN 9 V SFAHVSN Sbjct: 605 VVSFAHVSN 613>NP_060016 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASFAHVSN 9 ASFAH+ N Sbjct: 147 ASFAHLLN 154>NP_001036212 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASFAHVSN 9 +SFAH+ N Sbjct: 45 SSFAHIPN 52>NP_001036194 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASFAHVSN 9 +SFAH+ N Sbjct: 45 SSFAHIPN 52>NP_005239 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASFAHVSN 9 +SFAH+ N Sbjct: 45 SSFAHIPN 52>XP_006710515 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ASFAHVSN 9 +SFAH+ N Sbjct: 45 SSFAHIPN 52>NP_000042 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 1388 ATFAYISN 1395>NP_001073982 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 +FAH+SN Sbjct: 308 TFAHLSN 314>NP_031392 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 706 LASFAHI 712>NP_001007268 Length = 1324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 706 LASFAHI 712>NP_001182570 Length = 1461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 706 LASFAHI 712>XP_006718908 Length = 1708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 40 ATFAYISN 47>XP_005271621 Length = 2708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 1040 ATFAYISN 1047>XP_006718907 Length = 3050 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 1382 ATFAYISN 1389>XP_006718906 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 1388 ATFAYISN 1395>XP_005271619 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 1388 ATFAYISN 1395>XP_005271618 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+FA++SN Sbjct: 1388 ATFAYISN 1395>XP_005269338 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 +FAH+SN Sbjct: 308 TFAHLSN 314>XP_005269337 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 +FAH+SN Sbjct: 308 TFAHLSN 314>XP_005246452 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 19 LASFAHI 25>XP_006712432 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 29 LASFAHI 35>XP_005246450 Length = 1461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 706 LASFAHI 712>XP_005246449 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 +ASFAH+ Sbjct: 706 LASFAHI 712>NP_996763 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VASFAHV 7 VAS+AH+ Sbjct: 216 VASYAHI 222>NP_001267 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VASFAHVSN 9 + SFA++SN Sbjct: 55 IYSFANISN 63>NP_004035 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ASFAHVS 8 ASF HVS Sbjct: 263 ASFKHVS 269>NP_055637 Length = 1032 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VASFAHVS 8 V SFAH++ Sbjct: 946 VPSFAHIN 953>NP_001005850 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+F+HVS+ Sbjct: 397 AAFSHVSS 404>XP_005276733 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 +SFAH+S+ Sbjct: 64 SSFAHLSS 71>XP_005259517 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 +SFAH+S+ Sbjct: 64 SSFAHLSS 71>XP_005259440 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+F+HVS+ Sbjct: 397 AAFSHVSS 404>XP_005259439 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASFAHVSN 9 A+F+HVS+ Sbjct: 397 AAFSHVSS 404>XP_006716981 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 632 SFAHIS 637>XP_006716980 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>XP_005272572 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>XP_005272573 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>XP_005263436 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VASFAHVS 8 V SFAH++ Sbjct: 947 VPSFAHIN 954>XP_005263435 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VASFAHVS 8 V SFAH++ Sbjct: 947 VPSFAHIN 954>XP_006712608 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ASFAHVS 8 ASF HVS Sbjct: 204 ASFKHVS 210>NP_149350 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>NP_001128661 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 240 ANFAHFDN 247>XP_006712544 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 87 ANFAHFDN 94>XP_006712543 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 280 ANFAHFDN 287>XP_005246573 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 304 ANFAHFDN 311>XP_006712542 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 304 ANFAHFDN 311>XP_006712541 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 304 ANFAHFDN 311>NP_001128660 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 280 ANFAHFDN 287>NP_001128659 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 304 ANFAHFDN 311>NP_004495 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ASFAHVSN 9 A+FAH N Sbjct: 280 ANFAHFDN 287Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.116 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 445,824 Number of extensions: 606 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |