Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056099 17 2528 XP_006710565 17 2528 XP_006710564 17 2528 XP_005270743 17 2528 NP_001240622 16 5631 NP_001018081 15 9605 NP_001265179 15 9605 NP_001265180 15 9605 XP_005261449 15 9605 XP_005261448 15 9605 XP_006718577 15 9605 XP_006718576 15 9605 XP_006718575 15 9605 XP_006718573 15 9605 XP_006718572 15 9605 XP_006718571 15 9605 XP_006718570 15 9605 NP_872362 15 9605 NP_001070709 15 9605>NP_056099 Length = 3375 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AMLSFQYL 9 +MLSF+YL Sbjct: 949 SMLSFEYL 956>XP_006710565 Length = 3140 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AMLSFQYL 9 +MLSF+YL Sbjct: 657 SMLSFEYL 664>XP_006710564 Length = 3432 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AMLSFQYL 9 +MLSF+YL Sbjct: 949 SMLSFEYL 956>XP_005270743 Length = 3453 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AMLSFQYL 9 +MLSF+YL Sbjct: 970 SMLSFEYL 977>NP_001240622 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAMLSFQYL 9 +AM++ QYL Sbjct: 70 IAMVTIQYL 78>NP_001018081 Length = 1309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAMLSFQY 8 +AML FQ+ Sbjct: 583 IAMLRFQW 590>NP_001265179 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 251 VTFLSYEYL 259>NP_001265180 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241>XP_005261449 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMLSFQYL 9 A L+F+YL Sbjct: 12 AQLTFEYL 19>XP_005261448 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMLSFQYL 9 A L+F+YL Sbjct: 12 AQLTFEYL 19>XP_006718577 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 213 VTFLSYEYL 221>XP_006718576 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241>XP_006718575 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241>XP_006718573 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241>XP_006718572 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241>XP_006718571 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241>XP_006718570 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 275 VTFLSYEYL 283>NP_872362 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 275 VTFLSYEYL 283>NP_001070709 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAMLSFQYL 9 V LS++YL Sbjct: 233 VTFLSYEYL 241Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.143 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 324,191 Number of extensions: 242 Number of successful extensions: 19 Number of sequences better than 10000.0: 19 Number of HSP's gapped: 19 Number of HSP's successfully gapped: 19 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |