Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 390 NP_001027454 17 3301 XP_005269189 17 3301 XP_005269187 17 3301 NP_071504 17 4312 NP_000911 17 4312 NP_001035806 17 4312 NP_001025226 17 4312 NP_001164 17 4312 NP_775782 17 4312 XP_005267693 17 4312 XP_005267692 17 4312 XP_006718641 17 4312 XP_005274089 17 4312 XP_005274088 17 4312 XP_006718640 17 4312 NP_001273063 16 5631 NP_068751 16 5631 NP_055571 16 5631 NP_001008938 16 5631 XP_006718333 16 5631 XP_005253109 16 5631 NP_036336 16 5631 NP_009146 16 7355 XP_006721714 16 7355 NP_001027455 15 9605 NP_004295 15 9605 NP_005202 15 9605 NP_005712 15 9605 NP_001275634 15 9605 NP_079341 15 9605 NP_001129157 15 9605 NP_683692 15 9605 NP_055288 15 9605 NP_996844 15 9605 XP_005254439 15 9605 XP_006720568 15 9605 XP_005254438 15 9605 XP_005248208 15 9605 XP_005248207 15 9605 XP_006714021 15 9605 NP_001122107 15 9605 NP_002335 15 9605 NP_001122105 15 9605 NP_056487 15 9605>NP_002430 Length = 1137 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AKVGDKTE 9 AKVGDKTE Sbjct: 694 AKVGDKTE 701>NP_001027454 Length = 454 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKVGDKTE 9 A+VG+KTE Sbjct: 329 AEVGEKTE 336>XP_005269189 Length = 382 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKVGDKTE 9 A+VG+KTE Sbjct: 257 AEVGEKTE 264>XP_005269187 Length = 414 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AKVGDKTE 9 A+VG+KTE Sbjct: 289 AEVGEKTE 296>NP_071504 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>NP_000911 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>NP_001035806 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>NP_001025226 Length = 1502 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKVGDKTE 9 AK+ DKTE Sbjct: 1358 AKIPDKTE 1365>NP_001164 Length = 1501 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKVGDKTE 9 AK+ DKTE Sbjct: 1357 AKIPDKTE 1364>NP_775782 Length = 589 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAKVGDKT 8 V K GDKT Sbjct: 197 VCKAGDKT 204>XP_005267693 Length = 1502 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKVGDKTE 9 AK+ DKTE Sbjct: 1358 AKIPDKTE 1365>XP_005267692 Length = 1502 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AKVGDKTE 9 AK+ DKTE Sbjct: 1358 AKIPDKTE 1365>XP_006718641 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>XP_005274089 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>XP_005274088 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>XP_006718640 Length = 1178 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V K+GDK E Sbjct: 146 VRKMGDKVE 154>NP_001273063 Length = 531 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 +A GD+TE Sbjct: 261 IATAGDRTE 269>NP_068751 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 +A GD+TE Sbjct: 261 IATAGDRTE 269>NP_055571 Length = 1972 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAKVGDK 7 V+K+GDK Sbjct: 866 VSKIGDK 872>NP_001008938 Length = 2032 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAKVGDK 7 V+K+GDK Sbjct: 866 VSKIGDK 872>XP_006718333 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 +A GD+TE Sbjct: 151 IATAGDRTE 159>XP_005253109 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 +A GD+TE Sbjct: 265 IATAGDRTE 273>NP_036336 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KVGDKTE 9 KVG KTE Sbjct: 119 KVGSKTE 125>NP_009146 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V +G+KTE Sbjct: 228 VKSIGEKTE 236>XP_006721714 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 V +G+KTE Sbjct: 228 VKSIGEKTE 236>NP_001027455 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVGDKTE 9 +VG+KTE Sbjct: 221 QVGEKTE 227>NP_004295 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 1265 VAKIGD 1270>NP_005202 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 791 VAKIGD 796>NP_005712 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKVGDKTE 9 AKVGD+ + Sbjct: 41 AKVGDQAQ 48>NP_001275634 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 791 VAKIGD 796>NP_079341 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKVGDKT 8 +AK GDK+ Sbjct: 1 MAKAGDKS 8>NP_001129157 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 529 VAKIGD 534>NP_683692 Length = 3051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KVGDKTE 9 K GD+TE Sbjct: 752 KTGDETE 758>NP_055288 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAKVGDK 7 VAK GDK Sbjct: 164 VAKPGDK 170>NP_996844 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 598 VAKIGD 603>XP_005254439 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 270 VAKIGD 275>XP_006720568 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 566 VAKIGD 571>XP_005254438 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 614 VAKIGD 619>XP_005248208 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KVGDKTE 9 K GD+TE Sbjct: 752 KTGDETE 758>XP_005248207 Length = 3098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KVGDKTE 9 K GD+TE Sbjct: 752 KTGDETE 758>XP_006714021 Length = 3112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KVGDKTE 9 K GD+TE Sbjct: 752 KTGDETE 758>NP_001122107 Length = 1639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 + +VG KTE Sbjct: 947 MVRVGSKTE 955>NP_002335 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAKVGD 6 VAK+GD Sbjct: 659 VAKIGD 664>NP_001122105 Length = 1639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 + +VG KTE Sbjct: 947 MVRVGSKTE 955>NP_056487 Length = 1639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKVGDKTE 9 + +VG KTE Sbjct: 947 MVRVGSKTE 955Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.122 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,404 Number of extensions: 672 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |