Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 21 229 NP_004008 17 4312 NP_004009 17 4312 NP_004007 17 4312 NP_004014 17 4312 NP_004012 17 4312 NP_004004 17 4312 NP_004010 17 4312 NP_004006 17 4312 NP_004013 17 4312 NP_004002 17 4312 NP_004000 17 4312 NP_004001 17 4312 NP_004011 17 4312 NP_003997 17 4312 NP_000100 17 4312 NP_004005 17 4312 NP_004003 17 4312 XP_006724539 17 4312 XP_006724538 17 4312 XP_006724537 17 4312 XP_006724536 17 4312 XP_006724535 17 4312 XP_006724534 17 4312 XP_006724533 17 4312 XP_006724532 17 4312 XP_006724531 17 4312 NP_110380 16 5631 NP_001159530 16 5631 NP_001181966 16 5631 NP_001071174 16 5631 NP_064597 16 5631 NP_570718 16 5631 XP_006720680 16 5631 XP_006720679 16 5631 XP_006720678 16 5631 XP_006720677 16 5631 XP_006715535 16 5631 NP_149122 16 7355 NP_000303 16 7355 NP_002086 16 7355 NP_055865 16 7355 XP_006717367 16 7355 XP_006715091 16 7355 XP_005249012 16 7355 XP_006712696 16 7355 XP_005263774 16 7355 XP_005263773 16 7355 XP_005263772 16 7355 NP_003882 15 9605 NP_001243063 15 9605 NP_055455 15 9605 XP_006712938 15 9605 XP_006712937 15 9605 XP_006712936 15 9605 XP_005247034 15 9605>NP_002430 Length = 1137 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VAKGYKMGV 9 VAKGYK+GV Sbjct: 298 VAKGYKVGV 306>NP_004008 Length = 604 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 278 VAKGHKM 284>NP_004009 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 278 VAKGHKM 284>NP_004007 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 278 VAKGHKM 284>NP_004014 Length = 1133 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 886 VAKGHKM 892>NP_004012 Length = 1243 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 886 VAKGHKM 892>NP_004004 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 886 VAKGHKM 892>NP_004010 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 278 VAKGHKM 284>NP_004006 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 278 VAKGHKM 284>NP_004013 Length = 1230 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 886 VAKGHKM 892>NP_004002 Length = 2344 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 2005 VAKGHKM 2011>NP_004000 Length = 3681 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3342 VAKGHKM 3348>NP_004001 Length = 3562 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3223 VAKGHKM 3229>NP_004011 Length = 1115 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 886 VAKGHKM 892>NP_003997 Length = 3685 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3346 VAKGHKM 3352>NP_000100 Length = 3677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3338 VAKGHKM 3344>NP_004005 Length = 956 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 617 VAKGHKM 623>NP_004003 Length = 2341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 2002 VAKGHKM 2008>XP_006724539 Length = 2913 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 2556 VAKGHKM 2562>XP_006724538 Length = 3575 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3346 VAKGHKM 3352>XP_006724537 Length = 3593 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3346 VAKGHKM 3352>XP_006724536 Length = 3657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3300 VAKGHKM 3306>XP_006724535 Length = 3660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3303 VAKGHKM 3309>XP_006724534 Length = 3668 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3346 VAKGHKM 3352>XP_006724533 Length = 3690 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3346 VAKGHKM 3352>XP_006724532 Length = 3695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3338 VAKGHKM 3344>XP_006724531 Length = 3703 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VAKGYKM 7 VAKG+KM Sbjct: 3346 VAKGHKM 3352>NP_110380 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 VA+G K+G+ Sbjct: 69 VAEGVKLGI 77>NP_001159530 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AKGYKMGV 9 +KGY +G+ Sbjct: 562 SKGYSLGI 569>NP_001181966 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KGYKMGV 9 +GYK+GV Sbjct: 356 QGYKIGV 362>NP_001071174 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KGYKMGV 9 +GYK+GV Sbjct: 356 QGYKIGV 362>NP_064597 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 +AKG+ +GV Sbjct: 441 LAKGFPLGV 449>NP_570718 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AKGYKMGV 9 +KGY +G+ Sbjct: 586 SKGYSLGI 593>XP_006720680 Length = 608 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 +AKG+ +GV Sbjct: 441 LAKGFPLGV 449>XP_006720679 Length = 681 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 +AKG+ +GV Sbjct: 441 LAKGFPLGV 449>XP_006720678 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 +AKG+ +GV Sbjct: 412 LAKGFPLGV 420>XP_006720677 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 +AKG+ +GV Sbjct: 441 LAKGFPLGV 449>XP_006715535 Length = 946 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KGYKMGV 9 +GYK+GV Sbjct: 356 QGYKIGV 362>NP_149122 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKGYKMGV 9 VA+G K+G+ Sbjct: 66 VAEGIKIGI 74>NP_000303 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AKGYKMG 8 A GYK+G Sbjct: 163 APGYKLG 169>NP_002086 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AKGYKMGV 9 + GYK GV Sbjct: 70 SSGYKFGV 77>NP_055865 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKGYKMGV 9 V KG K+G+ Sbjct: 445 VCKGLKVGI 453>XP_006717367 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKGYKM 7 AKGYK+ Sbjct: 363 AKGYKL 368>XP_006715091 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKGYKMGV 9 V KG K+G+ Sbjct: 389 VCKGLKVGI 397>XP_005249012 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAKGYKMGV 9 V KG K+G+ Sbjct: 445 VCKGLKVGI 453>XP_006712696 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AKGYKMG 8 A GYK+G Sbjct: 171 APGYKLG 177>XP_005263774 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AKGYKMG 8 A GYK+G Sbjct: 184 APGYKLG 190>XP_005263773 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AKGYKMG 8 A GYK+G Sbjct: 218 APGYKLG 224>XP_005263772 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AKGYKMG 8 A GYK+G Sbjct: 224 APGYKLG 230>NP_003882 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AKGYKMG 8 A+GY++G Sbjct: 153 AQGYRLG 159>NP_001243063 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 AKGYKMG 8 A+GY++G Sbjct: 175 AQGYRLG 181>NP_055455 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGYKMGV 9 KG+ MGV Sbjct: 1073 KGFHMGV 1079>XP_006712938 Length = 1138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGYKMGV 9 KG+ MGV Sbjct: 1073 KGFHMGV 1079>XP_006712937 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGYKMGV 9 KG+ MGV Sbjct: 1073 KGFHMGV 1079>XP_006712936 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGYKMGV 9 KG+ MGV Sbjct: 1073 KGFHMGV 1079>XP_005247034 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KGYKMGV 9 KG+ MGV Sbjct: 1073 KGFHMGV 1079Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.138 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 489,521 Number of extensions: 663 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |