Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 869 NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 XP_005276813 18 1935 XP_005248455 18 1935 NP_001790 18 1935 NP_000982 17 4312 NP_056507 17 4312 NP_758441 17 4312 NP_055392 16 5631 NP_001258652 16 5631 NP_110420 16 5631 XP_006726853 16 5631 XP_005261530 16 5631 XP_006724279 16 5631 XP_006724278 16 5631 XP_006724277 16 5631 XP_006724276 16 5631 XP_006724275 16 5631 XP_005261529 16 5631 XP_006724274 16 5631 XP_006724273 16 5631 XP_005261528 16 5631 XP_005261527 16 5631 XP_006723596 16 5631 XP_006721182 16 5631 XP_006714860 16 5631 XP_006714859 16 5631 XP_005268570 16 5631 XP_006710111 16 5631 NP_001230913 15 9605 NP_068810 15 9605 NP_001138610 15 9605 NP_001230914 15 9605 NP_079366 15 9605 NP_073715 15 9605 NP_001009 15 9605 NP_005669 15 9605 XP_005257601 15 9605 XP_005257599 15 9605 XP_005257600 15 9605 NP_689497 15 9605>NP_001243398 Length = 1781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAIKRKR F Sbjct: 827 VAIKRKRPF 835>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAIKRKR F Sbjct: 1119 VAIKRKRPF 1127>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAIKRKR F Sbjct: 936 VAIKRKRPF 944>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAIKRKR F Sbjct: 1119 VAIKRKRPF 1127>XP_005276813 Length = 289 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VAIKRKRT 8 +AIKRKRT Sbjct: 268 LAIKRKRT 275>XP_005248455 Length = 289 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VAIKRKRT 8 +AIKRKRT Sbjct: 268 LAIKRKRT 275>NP_001790 Length = 346 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 VAIKRKRT 8 +AIKRKRT Sbjct: 325 LAIKRKRT 332>NP_000982 Length = 137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAIKRKRT 8 V +KRKRT Sbjct: 124 VMVKRKRT 131>NP_056507 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRKRTF Sbjct: 788 KRKRTF 793>NP_758441 Length = 745 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IKRKRTF 9 IK+KRTF Sbjct: 210 IKQKRTF 216>NP_055392 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 464 VAIQRKKQF 472>NP_001258652 Length = 943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIKRKRT 8 A+KRKRT Sbjct: 649 AMKRKRT 655>NP_110420 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIKRKRT 8 A+KRKRT Sbjct: 819 AMKRKRT 825>XP_006726853 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AIKRKRTF 9 ++KR+RTF Sbjct: 221 SLKRQRTF 228>XP_005261530 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 59 VAIQRKKQF 67>XP_006724279 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 77 VAIQRKKQF 85>XP_006724278 Length = 978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 501 VAIQRKKQF 509>XP_006724277 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 501 VAIQRKKQF 509>XP_006724276 Length = 1058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 464 VAIQRKKQF 472>XP_006724275 Length = 1060 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 501 VAIQRKKQF 509>XP_005261529 Length = 1095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 501 VAIQRKKQF 509>XP_006724274 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 464 VAIQRKKQF 472>XP_006724273 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 464 VAIQRKKQF 472>XP_005261528 Length = 1189 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 464 VAIQRKKQF 472>XP_005261527 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAIKRKRTF 9 VAI+RK+ F Sbjct: 501 VAIQRKKQF 509>XP_006723596 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AIKRKRTF 9 ++KR+RTF Sbjct: 221 SLKRQRTF 228>XP_006721182 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VAIKRKRT 8 VAI+RKR+ Sbjct: 19 VAIRRKRS 26>XP_006714860 Length = 1146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIKRKRT 8 A+KRKRT Sbjct: 852 AMKRKRT 858>XP_006714859 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIKRKRT 8 A+KRKRT Sbjct: 894 AMKRKRT 900>XP_005268570 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AIKRKRT 8 A+KRKRT Sbjct: 894 AMKRKRT 900>XP_006710111 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AIKRKRTF 9 ++KR+RTF Sbjct: 80 SLKRQRTF 87>NP_001230913 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRKRT+ Sbjct: 301 KRKRTY 306>NP_068810 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRKRT+ Sbjct: 301 KRKRTY 306>NP_001138610 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRKRT+ Sbjct: 298 KRKRTY 303>NP_001230914 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRKRT+ Sbjct: 301 KRKRTY 306>NP_079366 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRK+TF Sbjct: 811 KRKKTF 816>NP_073715 Length = 71 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAIKRKRT 8 V +KR+RT Sbjct: 23 VQVKRRRT 30>NP_001009 Length = 145 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 K+KRTF Sbjct: 7 KKKRTF 12>NP_005669 Length = 71 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAIKRKRT 8 V +KR+RT Sbjct: 23 VQVKRRRT 30>XP_005257601 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRK+TF Sbjct: 811 KRKKTF 816>XP_005257599 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRK+TF Sbjct: 811 KRKKTF 816>XP_005257600 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRKRTF 9 KRK+TF Sbjct: 811 KRKKTF 816>NP_689497 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AIKRKRTF 9 A+KRK+ F Sbjct: 68 ALKRKKRF 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.143 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,011 Number of extensions: 411 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |