Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_775771 20 509 NP_115927 20 509 XP_006720466 20 509 XP_005254230 20 509 XP_006720465 20 509 XP_005254228 20 509 XP_006715292 20 509 NP_694536 17 3301 NP_003788 17 3301 XP_005274430 17 3301 XP_006718794 17 3301 XP_006718793 17 3301 XP_005250261 17 3301 XP_005250260 17 3301 NP_690852 17 3301 NP_444282 16 5631 NP_004268 16 5631 NP_001190981 16 5631 NP_001190980 16 5631 XP_005273812 16 5631 XP_006715337 16 5631 XP_005249541 16 5631 XP_005249540 16 5631 NP_001108091 16 7355 NP_001108092 16 7355 NP_001108090 16 7355 NP_002397 16 7355 NP_001108089 16 7355 NP_001264162 16 7355 NP_003264 16 7355 XP_006714930 16 7355 XP_006714929 16 7355 XP_005265973 16 7355 XP_005265972 16 7355 NP_001243342 15 9605 NP_001035196 15 9605 NP_061028 15 9605 NP_115745 15 9605 NP_055816 15 9605 NP_004808 15 9605 NP_001164101 15 9605 NP_963923 15 9605 NP_001073276 15 9605 NP_001073275 15 9605 NP_055039 15 9605 NP_056493 15 9605 NP_001163886 15 9605 NP_036263 15 9605 XP_005276461 15 9605 XP_006719869 15 9605 XP_006719868 15 9605 XP_005266408 15 9605 XP_005266407 15 9605 XP_005266403 15 9605 XP_006719867 15 9605 XP_006719866 15 9605 XP_005266405 15 9605 XP_005266404 15 9605 XP_006719703 15 9605 XP_005254005 15 9605 XP_005252372 15 9605 XP_006717387 15 9605 XP_005252371 15 9605 XP_005252370 15 9605 XP_005252369 15 9605 XP_005252368 15 9605 XP_006714394 15 9605 XP_005263325 15 9605 XP_005263324 15 9605 NP_001163885 15 9605 NP_001163887 15 9605>NP_775771 Length = 1244 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 183 VAGFRGTVR 191>NP_115927 Length = 1321 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 196 VAGFRGTVR 204>XP_006720466 Length = 1175 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 114 VAGFRGTVR 122>XP_005254230 Length = 1175 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 114 VAGFRGTVR 122>XP_006720465 Length = 1239 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 178 VAGFRGTVR 186>XP_005254228 Length = 1250 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 189 VAGFRGTVR 197>XP_006715292 Length = 759 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAGFRG VR Sbjct: 183 VAGFRGTVR 191>NP_694536 Length = 400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAG RG++R Sbjct: 165 VAGSRGIIR 173>NP_003788 Length = 441 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAG RG++R Sbjct: 165 VAGSRGIIR 173>XP_005274430 Length = 361 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAG RG++R Sbjct: 165 VAGSRGIIR 173>XP_006718794 Length = 390 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAG RG++R Sbjct: 165 VAGSRGIIR 173>XP_006718793 Length = 403 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 VAG RG++R Sbjct: 165 VAGSRGIIR 173>XP_005250261 Length = 495 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 AG RG+VR Sbjct: 216 AGLRGLVR 223>XP_005250260 Length = 595 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 AG RG+VR Sbjct: 368 AGLRGLVR 375>NP_690852 Length = 647 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 AG RG+VR Sbjct: 368 AGLRGLVR 375>NP_444282 Length = 780 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAGFRGMVR 9 + GFR M+R Sbjct: 433 IQGFREMIR 441>NP_004268 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_001190981 Length = 245 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_001190980 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 A +RGMVR Sbjct: 66 APYRGMVR 73>XP_005273812 Length = 649 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAGFRGMVR 9 + GFR M+R Sbjct: 302 IQGFREMIR 310>XP_006715337 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 A +RGMVR Sbjct: 66 APYRGMVR 73>XP_005249541 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 A +RGMVR Sbjct: 18 APYRGMVR 25>XP_005249540 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGFRGMVR 9 A +RGMVR Sbjct: 66 APYRGMVR 73>NP_001108091 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>NP_001108092 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>NP_001108090 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>NP_002397 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>NP_001108089 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>NP_001264162 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 V+G+ GMVR Sbjct: 312 VSGWWGMVR 320>NP_003264 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAGFRGMVR 9 V+G+ GMVR Sbjct: 339 VSGWWGMVR 347>XP_006714930 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>XP_006714929 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>XP_005265973 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>XP_005265972 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AGFRGMV 8 AG+RG+V Sbjct: 414 AGYRGIV 420>NP_001243342 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRGM+R Sbjct: 68 FRGMLR 73>NP_001035196 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRGM+R Sbjct: 88 FRGMLR 93>NP_061028 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GFRGMVR 9 G RGM+R Sbjct: 2 GIRGMLR 8>NP_115745 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRGM+R Sbjct: 88 FRGMLR 93>NP_055816 Length = 3664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAGFRG 6 V+GFRG Sbjct: 104 VSGFRG 109>NP_004808 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 563 FRGLVR 568>NP_001164101 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 563 FRGLVR 568>NP_963923 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 563 FRGLVR 568>NP_001073276 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VAGFRGM 7 ++GF+GM Sbjct: 345 ISGFQGM 351>NP_001073275 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VAGFRGM 7 ++GF+GM Sbjct: 345 ISGFQGM 351>NP_055039 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VAGFRGM 7 ++GF+GM Sbjct: 345 ISGFQGM 351>NP_056493 Length = 2946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>NP_001163886 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 567 FRGLVR 572>NP_036263 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAGFRGMV 8 V GF GMV Sbjct: 12 VLGFLGMV 19>XP_005276461 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VAGFRGM 7 ++GF+GM Sbjct: 345 ISGFQGM 351>XP_006719869 Length = 2943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719868 Length = 2938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266408 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266407 Length = 2641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 980 GFRGM 984>XP_005266403 Length = 2941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719867 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719866 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266405 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266404 Length = 2967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 GFRGM 7 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719703 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRGM+R Sbjct: 88 FRGMLR 93>XP_005254005 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRGM+R Sbjct: 88 FRGMLR 93>XP_005252372 Length = 1102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 622 FRGLVR 627>XP_006717387 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 561 FRGLVR 566>XP_005252371 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 567 FRGLVR 572>XP_005252370 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 622 FRGLVR 627>XP_005252369 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 586 FRGLVR 591>XP_005252368 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 622 FRGLVR 627>XP_006714394 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAGFRG 6 V+GFRG Sbjct: 26 VSGFRG 31>XP_005263325 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAGFRG 6 V+GFRG Sbjct: 26 VSGFRG 31>XP_005263324 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAGFRG 6 V+GFRG Sbjct: 26 VSGFRG 31>NP_001163885 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 540 FRGLVR 545>NP_001163887 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FRGMVR 9 FRG+VR Sbjct: 594 FRGLVR 599Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.154 0.467 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,441 Number of extensions: 885 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |