Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_258411 17 3301 NP_001363 17 3301 XP_005257845 17 3301 XP_005257844 17 3301 XP_006721530 17 3301 XP_006721529 17 3301 XP_006721528 17 3301 NP_004557 16 5631 NP_001138915 16 5631 NP_001269559 16 5631 NP_001193665 16 5631 NP_061327 16 5631 NP_057227 16 5631 XP_005252521 16 5631 XP_005252520 16 5631 XP_005249598 16 5631 XP_005249596 16 5631 XP_005249594 16 5631 NP_057336 16 7355 NP_660183 16 7355 NP_037390 16 7355 NP_005500 16 7355 NP_001277250 16 7355 XP_006714623 16 7355 XP_005271970 16 7355 XP_005271969 16 7355 XP_005271967 16 7355 XP_005271966 16 7355 XP_006712120 16 7355 XP_005264512 16 7355 XP_005264511 16 7355 XP_006712119 16 7355 XP_005264510 16 7355 XP_006712118 16 7355 XP_005264509 16 7355 XP_005264508 16 7355 XP_006712117 16 7355 XP_005264507 16 7355 XP_005264506 16 7355 NP_005853 15 9605 NP_001035706 15 9605 NP_078863 15 9605 NP_004165 15 9605 NP_001271280 15 9605 XP_005255000 15 9605 XP_005254998 15 9605 XP_006713534 15 9605 XP_005271253 15 9605 NP_787107 15 9605 NP_001013665 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFFLESI 8 VAFFLESI Sbjct: 1294 VAFFLESI 1301>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFFLESI 8 VAFFLESI Sbjct: 1294 VAFFLESI 1301>NP_258411 Length = 638 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFFLES+ Sbjct: 612 AFFLESV 618>NP_001363 Length = 4486 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFLE + Sbjct: 1488 VAFFLEEV 1495>XP_005257845 Length = 400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFFLES+ Sbjct: 374 AFFLESV 380>XP_005257844 Length = 400 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFFLES+ Sbjct: 374 AFFLESV 380>XP_006721530 Length = 2746 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFLE + Sbjct: 1488 VAFFLEEV 1495>XP_006721529 Length = 2817 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFLE + Sbjct: 1488 VAFFLEEV 1495>XP_006721528 Length = 3869 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFLE + Sbjct: 1488 VAFFLEEV 1495>NP_004557 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFF+ES+ Sbjct: 148 AFFIESV 154>NP_001138915 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFF+ES+ Sbjct: 128 AFFIESV 134>NP_001269559 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFF+ES+ Sbjct: 162 AFFIESV 168>NP_001193665 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FFLESIG 9 FFLES G Sbjct: 25 FFLESAG 31>NP_061327 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FFLESIG 9 FFLES G Sbjct: 25 FFLESAG 31>NP_057227 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FFLESIG 9 FFLES G Sbjct: 25 FFLESAG 31>XP_005252521 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFF+ES+ Sbjct: 148 AFFIESV 154>XP_005252520 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AFFLESI 8 AFF+ES+ Sbjct: 148 AFFIESV 154>XP_005249598 Length = 1027 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 V FFLES+ Sbjct: 8 VRFFLESL 15>XP_005249596 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 V FFLES+ Sbjct: 8 VRFFLESL 15>XP_005249594 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 V FFLES+ Sbjct: 8 VRFFLESL 15>NP_057336 Length = 4857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3764 VAFFLQCI 3771>NP_660183 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAFFLESIG 9 V+F+LE+ G Sbjct: 57 VSFYLETYG 65>NP_037390 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAFFLESIG 9 V+F+LE+ G Sbjct: 57 VSFYLETYG 65>NP_005500 Length = 3027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 107 FFLESI 112>NP_001277250 Length = 3048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 107 FFLESI 112>XP_006714623 Length = 1625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 107 FFLESI 112>XP_005271970 Length = 2931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 107 FFLESI 112>XP_005271969 Length = 3020 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 41 FFLESI 46>XP_005271967 Length = 3065 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 107 FFLESI 112>XP_005271966 Length = 3086 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FFLESI 8 FFLESI Sbjct: 107 FFLESI 112>XP_006712120 Length = 4812 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3719 VAFFLQCI 3726>XP_005264512 Length = 4840 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3747 VAFFLQCI 3754>XP_005264511 Length = 4847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3791 VAFFLQCI 3798>XP_006712119 Length = 4851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3758 VAFFLQCI 3765>XP_005264510 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3768 VAFFLQCI 3775>XP_006712118 Length = 4864 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3771 VAFFLQCI 3778>XP_005264509 Length = 4870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3777 VAFFLQCI 3784>XP_005264508 Length = 4875 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3782 VAFFLQCI 3789>XP_006712117 Length = 4878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3785 VAFFLQCI 3792>XP_005264507 Length = 4880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3787 VAFFLQCI 3794>XP_005264506 Length = 4884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAFFLESI 8 VAFFL+ I Sbjct: 3791 VAFFLQCI 3798>NP_005853 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAFFLES 7 V FFLES Sbjct: 469 VLFFLES 475>NP_001035706 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FFLESIG 9 FFL++IG Sbjct: 497 FFLKNIG 503>NP_078863 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFFLESIG 9 + FF ES+G Sbjct: 74 MVFFSESLG 82>NP_004165 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAFFLESIG 9 V+FF+ S+G Sbjct: 252 VSFFVVSLG 260>NP_001271280 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAFFLESIG 9 V+FF+ S+G Sbjct: 252 VSFFVVSLG 260>XP_005255000 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FFLESIG 9 FFL++IG Sbjct: 461 FFLKNIG 467>XP_005254998 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FFLESIG 9 FFL++IG Sbjct: 497 FFLKNIG 503>XP_006713534 Length = 1222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAFFLES 7 V FFLES Sbjct: 433 VLFFLES 439>XP_005271253 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFFLESIG 9 + FF ES+G Sbjct: 1 MVFFSESLG 9>NP_787107 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FFLESIG 9 FFL S+G Sbjct: 34 FFLASVG 40>NP_001013665 Length = 98 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FFLESIG 9 FF+ES G Sbjct: 76 FFIESCG 82Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.154 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 354,130 Number of extensions: 343 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |