Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 21 229 NP_001277143 21 229 NP_001319 21 229 NP_001012632 21 229 NP_001077383 21 229 NP_001320 21 229 NP_073713 21 229 XP_005269629 21 229 XP_005269628 21 229 XP_005269627 21 229 XP_005269626 21 229 XP_006717706 21 229 XP_005269625 21 229 XP_005269624 21 229 XP_006717705 21 229 XP_005269622 21 229 XP_005269621 21 229 XP_006717704 21 229 XP_005269619 21 229 XP_005269618 21 229 XP_005272320 21 229 XP_005272319 21 229 XP_005272318 21 229 XP_005276368 17 4312 XP_005250138 17 4312 XP_005276070 17 4312 NP_001009905 16 7355 XP_006725352 16 7355 XP_006722336 16 7355 XP_006722335 16 7355 NP_003059 15 9605 NP_699193 15 9605 NP_001163894 15 9605 NP_848519 15 9605 NP_079182 15 9605 NP_001164111 15 9605 NP_036251 15 9605 NP_001032671 15 9605 NP_001164110 15 9605 NP_001034892 15 9605 NP_001186017 15 9605 NP_001186015 15 9605 NP_001186016 15 9605 NP_150278 15 9605 NP_001002006 15 9605 NP_001186032 15 9605 NP_001186033 15 9605 NP_001012977 15 9605 NP_001180473 15 9605 NP_001146 15 9605 XP_005251917 15 9605 XP_005268489 15 9605>NP_001277144 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>NP_001277143 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>NP_001319 Length = 440 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 51 VAFCDAQS 58>NP_001012632 Length = 429 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 40 VAFCDAQS 47>NP_001077383 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>NP_001320 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>NP_073713 Length = 985 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 597 VAFCDAQS 604>XP_005269629 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269628 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269627 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269626 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_006717706 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269625 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269624 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_006717705 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269622 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269621 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_006717704 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269619 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005269618 Length = 445 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 57 VAFCDAQS 64>XP_005272320 Length = 430 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 40 VAFCDAQS 47>XP_005272319 Length = 430 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 40 VAFCDAQS 47>XP_005272318 Length = 441 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VAFCDAQS 8 VAFCDAQS Sbjct: 51 VAFCDAQS 58>XP_005276368 Length = 103 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AFCDAQ 7 A+CDAQ Sbjct: 46 AYCDAQ 51>XP_005250138 Length = 103 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AFCDAQ 7 A+CDAQ Sbjct: 46 AYCDAQ 51>XP_005276070 Length = 103 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AFCDAQ 7 A+CDAQ Sbjct: 46 AYCDAQ 51>NP_001009905 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 VAFCD 5 VAFCD Sbjct: 289 VAFCD 293>XP_006725352 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 VAFCD 5 VAFCD Sbjct: 274 VAFCD 278>XP_006722336 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 VAFCD 5 VAFCD Sbjct: 274 VAFCD 278>XP_006722335 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 VAFCD 5 VAFCD Sbjct: 289 VAFCD 293>NP_003059 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 CDAQS 8 CDAQS Sbjct: 151 CDAQS 155>NP_699193 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FCDAQS 8 +CDA+S Sbjct: 338 YCDAES 343>NP_001163894 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FCDAQS 8 +CDA+S Sbjct: 338 YCDAES 343>NP_848519 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFCDAQSM 9 VAFC A ++ Sbjct: 128 VAFCHANNI 136>NP_079182 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 + FCDA+ Sbjct: 11 IPFCDAK 17>NP_001164111 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFCDAQSM 9 VAFC A ++ Sbjct: 115 VAFCHANNI 123>NP_036251 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFCDAQSM 9 VAFC A ++ Sbjct: 115 VAFCHANNI 123>NP_001032671 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 + FCDA+ Sbjct: 11 IPFCDAK 17>NP_001164110 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFCDAQSM 9 VAFC A ++ Sbjct: 115 VAFCHANNI 123>NP_001034892 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFCDAQSM 9 VAFC A ++ Sbjct: 115 VAFCHANNI 123>NP_001186017 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 457 MAYCDTQ 463>NP_001186015 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 438 MAYCDTQ 444>NP_001186016 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 472 MAYCDTQ 478>NP_150278 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 395 MAYCDTQ 401>NP_001002006 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 455 MAYCDTQ 461>NP_001186032 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 397 MAYCDTQ 403>NP_001186033 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 VAFCDAQ 7 +A+CD Q Sbjct: 455 MAYCDTQ 461>NP_001012977 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 FCDAQS 8 +CDA+S Sbjct: 664 YCDAES 669>NP_001180473 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AFCDAQSM 9 A+CDA+ + Sbjct: 62 AYCDAKEI 69>NP_001146 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AFCDAQSM 9 A+CDA+ + Sbjct: 94 AYCDAKEI 101>XP_005251917 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAFCDAQSM 9 VAFC A ++ Sbjct: 115 VAFCHANNI 123>XP_005268489 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 AFCDAQSM 9 A+CDA+ + Sbjct: 94 AYCDAKEI 101Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.127 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,846 Number of extensions: 425 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |