Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1135 XP_005267290 18 1135 NP_078963 17 2528 NP_001186131 17 2528 NP_001186130 17 2528 XP_005247836 17 2528 XP_006713811 17 2528 XP_006713810 17 2528 XP_005247834 17 2528 NP_071760 16 5631 NP_055640 16 7355 NP_001116856 15 9605 NP_001116855 15 9605 NP_060215 15 9605 NP_001116857 15 9605 NP_056306 15 9605 NP_116259 15 9605 NP_055523 15 9605 NP_065145 15 9605 NP_659436 15 9605 XP_005272677 15 9605 XP_005272676 15 9605 XP_005272675 15 9605 XP_005272674 15 9605 XP_006724599 15 9605 XP_005272673 15 9605 XP_006722338 15 9605 XP_006719769 15 9605 XP_006715515 15 9605 XP_006715514 15 9605 XP_006715513 15 9605 XP_005266974 15 9605 XP_005266973 15 9605 XP_005266972 15 9605 XP_005266971 15 9605 XP_005266970 15 9605 XP_005266969 15 9605>NP_005091 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VAEQNELSL 9 VAEQ+ELSL Sbjct: 68 VAEQDELSL 76>XP_005267290 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VAEQNELSL 9 VAEQ+ELSL Sbjct: 68 VAEQDELSL 76>NP_078963 Length = 800 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 681 ITDQNELSL 689>NP_001186131 Length = 771 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 652 ITDQNELSL 660>NP_001186130 Length = 839 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 720 ITDQNELSL 728>XP_005247836 Length = 627 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 508 ITDQNELSL 516>XP_006713811 Length = 800 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 681 ITDQNELSL 689>XP_006713810 Length = 838 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 719 ITDQNELSL 727>XP_005247834 Length = 839 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 + +QNELSL Sbjct: 720 ITDQNELSL 728>NP_071760 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAEQNELS 8 +AEQNE S Sbjct: 473 IAEQNESS 480>NP_055640 Length = 2271 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EQNELSL 9 EQN+LSL Sbjct: 1552 EQNKLSL 1558>NP_001116856 Length = 1703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1053 IAEQNE 1058>NP_001116855 Length = 1721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>NP_060215 Length = 1721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>NP_001116857 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>NP_056306 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 462 EQNSLSL 468>NP_116259 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 462 EQNSLSL 468>NP_055523 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 +AE NE++L Sbjct: 1804 IAEVNEINL 1812>NP_065145 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AEQNELS 8 AEQ+ELS Sbjct: 183 AEQDELS 189>NP_659436 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AEQNELSL 9 AEQ +LSL Sbjct: 329 AEQEQLSL 336>XP_005272677 Length = 1703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1053 IAEQNE 1058>XP_005272676 Length = 1737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1053 IAEQNE 1058>XP_005272675 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>XP_005272674 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>XP_006724599 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>XP_005272673 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAEQNE 6 +AEQNE Sbjct: 1071 IAEQNE 1076>XP_006722338 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AEQNELSL 9 AEQ +LSL Sbjct: 329 AEQEQLSL 336>XP_006719769 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAEQNELSL 9 +AE NE++L Sbjct: 1804 IAEVNEINL 1812>XP_006715515 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 367 EQNSLSL 373>XP_006715514 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 367 EQNSLSL 373>XP_006715513 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 367 EQNSLSL 373>XP_005266974 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 462 EQNSLSL 468>XP_005266973 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 462 EQNSLSL 468>XP_005266972 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 462 EQNSLSL 468>XP_005266971 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 507 EQNSLSL 513>XP_005266970 Length = 868 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 525 EQNSLSL 531>XP_005266969 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EQNELSL 9 EQN LSL Sbjct: 525 EQNSLSL 531Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.115 0.256 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 406,034 Number of extensions: 424 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |