Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 20 299 XP_005248577 20 299 XP_005248576 20 299 NP_005206 18 1935 XP_005258261 18 1935 NP_065754 17 2528 NP_004611 17 3301 NP_665802 17 3301 NP_055454 17 4312 NP_001007528 17 4312 NP_001495 16 7355 NP_001136269 16 7355 NP_852091 16 7355 NP_789789 16 7355 NP_000706 16 7355 XP_005262314 16 7355 XP_005262313 16 7355 XP_006724622 16 7355 XP_005272727 16 7355 XP_005273308 16 7355 XP_005273309 16 7355 NP_001243092 15 9605 NP_001243095 15 9605 NP_001157 15 9605 NP_006197 15 9605 NP_001069 15 9605 NP_001186763 15 9605 NP_542413 15 9605 NP_001618 15 9605 NP_008995 15 9605 NP_001019831 15 9605 NP_001191433 15 9605 NP_821077 15 9605 NP_001191435 15 9605 NP_001191434 15 9605 NP_690874 15 9605 NP_002301 15 9605 NP_001121143 15 9605 NP_001230212 15 9605 NP_001230210 15 9605 NP_001230209 15 9605 NP_001156 15 9605 NP_892007 15 9605 NP_056273 15 9605 NP_055616 15 9605 NP_001276077 15 9605 NP_001276078 15 9605 NP_061138 15 9605 XP_005254945 15 9605 XP_005254944 15 9605 XP_005266328 15 9605 XP_006714104 15 9605 XP_005265800 15 9605 XP_006714103 15 9605 XP_006714102 15 9605 XP_006713877 15 9605 XP_006713876 15 9605 XP_006713875 15 9605 XP_006713874 15 9605 XP_006713873 15 9605 XP_005273329 15 9605>NP_005912 Length = 1512 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 V DTILVKC Sbjct: 683 VVDTILVKC 691>XP_005248577 Length = 1349 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 V DTILVKC Sbjct: 520 VVDTILVKC 528>XP_005248576 Length = 1375 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 V DTILVKC Sbjct: 546 VVDTILVKC 554>NP_005206 Length = 1447 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT+L+KC Sbjct: 153 MGDTVLLKC 161>XP_005258261 Length = 1447 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT+L+KC Sbjct: 153 MGDTVLLKC 161>NP_065754 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT+++KC Sbjct: 282 LGDTLIIKC 290>NP_004611 Length = 522 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTILVKC 9 DT+LV+C Sbjct: 491 DTLLVRC 497>NP_665802 Length = 522 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTILVKC 9 DT+LV+C Sbjct: 491 DTLLVRC 497>NP_055454 Length = 1564 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 VA T+L KC Sbjct: 1106 VAKTLLFKC 1114>NP_001007528 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTIL KC Sbjct: 269 DTILKKC 275>NP_001495 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VADTILV 7 VADT+LV Sbjct: 97 VADTLLV 103>NP_001136269 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VADTILV 7 VADT+LV Sbjct: 144 VADTLLV 150>NP_852091 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 VAD L+KC Sbjct: 285 VADRKLLKC 293>NP_789789 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTILVKC 9 D+ILV+C Sbjct: 383 DSILVQC 389>NP_000706 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI+ KC Sbjct: 261 DTIVFKC 267>XP_005262314 Length = 278 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VADTILV 7 VADT+LV Sbjct: 107 VADTLLV 113>XP_005262313 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VADTILV 7 VADT+LV Sbjct: 107 VADTLLV 113>XP_006724622 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTILVKC 9 D+ILV+C Sbjct: 299 DSILVQC 305>XP_005272727 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DTILVKC 9 D+ILV+C Sbjct: 325 DSILVQC 331>XP_005273308 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI+ KC Sbjct: 261 DTIVFKC 267>XP_005273309 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI+ KC Sbjct: 261 DTIVFKC 267>NP_001243092 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DTILVK 8 DTILVK Sbjct: 511 DTILVK 516>NP_001243095 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DTILVK 8 DTILVK Sbjct: 462 DTILVK 467>NP_001157 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DTILVK 8 DTILVK Sbjct: 511 DTILVK 516>NP_006197 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 V +TI V+C Sbjct: 493 VEETIAVRC 501>NP_001069 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DT+++ C Sbjct: 617 DTVIISC 623>NP_001186763 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DT+++ C Sbjct: 555 DTVIISC 561>NP_542413 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DT+++ C Sbjct: 525 DTVIISC 531>NP_001618 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI++ C Sbjct: 37 DTIIIPC 43>NP_008995 Length = 1289 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 787 LGDTVILQC 795>NP_001019831 Length = 2986 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 2484 LGDTVILQC 2492>NP_001191433 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 VAD + KC Sbjct: 539 VADAVASKC 547>NP_821077 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 VAD + KC Sbjct: 539 VADAVASKC 547>NP_001191435 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 VAD + KC Sbjct: 403 VADAVASKC 411>NP_001191434 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 VAD + KC Sbjct: 403 VADAVASKC 411>NP_690874 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 VAD + KC Sbjct: 539 VADAVASKC 547>NP_002301 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ADTILVK 8 AD+ILVK Sbjct: 737 ADSILVK 743>NP_001121143 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ADTILVK 8 AD+ILVK Sbjct: 737 ADSILVK 743>NP_001230212 Length = 133 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI++ C Sbjct: 37 DTIIIPC 43>NP_001230210 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI++ C Sbjct: 37 DTIIIPC 43>NP_001230209 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 DTILVKC 9 DTI++ C Sbjct: 37 DTIIIPC 43>NP_001156 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DTILVK 8 DTILVK Sbjct: 497 DTILVK 502>NP_892007 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DTILVK 8 DTILVK Sbjct: 497 DTILVK 502>NP_056273 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TILVKC 9 TI++KC Sbjct: 68 TIIIKC 73>NP_055616 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 VADT+ V C Sbjct: 2106 VADTLGVVC 2114>NP_001276077 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 V DT +KC Sbjct: 224 VDDTFRIKC 232>NP_001276078 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 V DT +KC Sbjct: 160 VDDTFRIKC 168>NP_061138 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 V DT +KC Sbjct: 251 VDDTFRIKC 259>XP_005254945 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 V DT +KC Sbjct: 251 VDDTFRIKC 259>XP_005254944 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 V DT +KC Sbjct: 160 VDDTFRIKC 168>XP_005266328 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VADTILVKC 9 VAD + KC Sbjct: 294 VADAVASKC 302>XP_006714104 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 V +TI V+C Sbjct: 518 VEETIAVRC 526>XP_005265800 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 V +TI V+C Sbjct: 493 VEETIAVRC 501>XP_006714103 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 V +TI V+C Sbjct: 515 VEETIAVRC 523>XP_006714102 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 V +TI V+C Sbjct: 518 VEETIAVRC 526>XP_006713877 Length = 2956 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 2454 LGDTVILQC 2462>XP_006713876 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 2464 LGDTVILQC 2472>XP_006713875 Length = 2975 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 2473 LGDTVILQC 2481>XP_006713874 Length = 2979 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 2477 LGDTVILQC 2485>XP_006713873 Length = 2988 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 VADTILVKC 9 + DT++++C Sbjct: 2486 LGDTVILQC 2494>XP_005273329 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VADTILVKC 9 VADT+ V C Sbjct: 1903 VADTLGVVC 1911Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.141 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,493 Number of extensions: 760 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |