Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006726390                                                           18    1135
XP_006726389                                                           18    1135
XP_006726388                                                           18    1135
XP_006726387                                                           18    1135
XP_006711142                                                           18    1135
XP_006711141                                                           18    1135
XP_006711140                                                           18    1135
XP_006710131                                                           18    1135
XP_006710130                                                           18    1135
XP_006710129                                                           18    1135
XP_006710128                                                           18    1135
NP_775915                                                              17    2528
NP_001035858                                                           17    2528
NP_057206                                                              17    2528
XP_005268999                                                           17    2528
XP_006719500                                                           17    2528
NP_001457                                                              17    2528
NP_006212                                                              17    3301
NP_149162                                                              17    3301
NP_001835                                                              17    3301
XP_006719305                                                           17    3301
NP_001276834                                                           17    4312
NP_055154                                                              17    4312
NP_115812                                                              17    4312
NP_001157617                                                           17    4312
NP_001399                                                              17    4312
NP_001157616                                                           17    4312
XP_005266254                                                           17    4312
XP_006712967                                                           17    4312
XP_006710468                                                           17    4312
XP_005270637                                                           17    4312
NP_001167579                                                           17    4312
NP_057301                                                              17    4312
NP_004632                                                              16    5631
NP_001182555                                                           16    5631
NP_004180                                                              16    5631
NP_001171619                                                           16    5631
NP_005928                                                              16    5631
NP_001271431                                                           16    5631
XP_006725391                                                           16    5631
XP_006725389                                                           16    5631
XP_006725388                                                           16    5631
XP_006725387                                                           16    5631
XP_005257438                                                           16    5631
XP_006721974                                                           16    5631
XP_006721973                                                           16    5631
XP_005257436                                                           16    5631
XP_005252669                                                           16    5631
XP_006717572                                                           16    5631
XP_005252667                                                           16    5631
XP_005252666                                                           16    5631
XP_005252665                                                           16    5631
XP_005252663                                                           16    5631
XP_005252662                                                           16    5631
XP_005262946                                                           16    5631
XP_005262945                                                           16    5631
NP_008872                                                              16    7355
NP_000337                                                              16    7355
NP_071899                                                              16    7355
NP_001120965                                                           16    7355
NP_066187                                                              16    7355
NP_001139                                                              16    7355
NP_055897                                                              16    7355
NP_079494                                                              16    7355
NP_060889                                                              16    7355
NP_055402                                                              16    7355
NP_113627                                                              16    7355
XP_005267208                                                           16    7355
XP_006714257                                                           16    7355
XP_006714256                                                           16    7355
XP_006714255                                                           16    7355
XP_005263005                                                           16    7355
XP_006714254                                                           16    7355
XP_006714253                                                           16    7355
XP_005263002                                                           16    7355
XP_005262999                                                           16    7355
XP_006714252                                                           16    7355
XP_006714251                                                           16    7355
XP_006714250                                                           16    7355
NP_000042                                                              15    9605
NP_055213                                                              15    9605
NP_001191169                                                           15    9605
NP_001078906                                                           15    9605
NP_115871                                                              15    9605
NP_114143                                                              15    9605
XP_005259717                                                           15    9605
XP_005259716                                                           15    9605
XP_005255186                                                           15    9605
XP_006718907                                                           15    9605
XP_006718906                                                           15    9605
XP_005271619                                                           15    9605
XP_005271618                                                           15    9605
NP_777563                                                              15    9605
>XP_006726390
          Length = 1353

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006726389
          Length = 1471

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006726388
          Length = 1489

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006726387
          Length = 1497

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006711142
          Length = 1471

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006711141
          Length = 1489

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006711140
          Length = 1497

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006710131
          Length = 1353

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006710130
          Length = 1471

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006710129
          Length = 1489

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>XP_006710128
          Length = 1497

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 2   AARLRCQ 8
           AARLRCQ
Sbjct: 251 AARLRCQ 257
>NP_775915
          Length = 126

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  RLRCQH 9
          RL+CQH
Sbjct: 21 RLKCQH 26
>NP_001035858
          Length = 701

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  RLRCQH 9
          RLRC+H
Sbjct: 39 RLRCEH 44
>NP_057206
          Length = 701

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  RLRCQH 9
          RLRC+H
Sbjct: 39 RLRCEH 44
>XP_005268999
          Length = 617

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  RLRCQH 9
          RLRC+H
Sbjct: 39 RLRCEH 44
>XP_006719500
          Length = 701

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  RLRCQH 9
          RLRC+H
Sbjct: 39 RLRCEH 44
>NP_001457
          Length = 565

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   RLRCQH 9
           RLRC+H
Sbjct: 135 RLRCEH 140
>NP_006212
          Length = 163

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  ARLRCQH 9
          AR+RC H
Sbjct: 53 ARVRCSH 59
>NP_149162
          Length = 1418

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  VAARLRCQ 8
          VAA LRCQ
Sbjct: 17 VAAVLRCQ 24
>NP_001835
          Length = 1487

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  VAARLRCQ 8
          VAA LRCQ
Sbjct: 17 VAAVLRCQ 24
>XP_006719305
          Length = 1488

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  VAARLRCQ 8
          VAA LRCQ
Sbjct: 17 VAAVLRCQ 24
>NP_001276834
          Length = 832

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   RLRCQH 9
           RLRC H
Sbjct: 432 RLRCDH 437
>NP_055154
          Length = 866

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   RLRCQH 9
           RLRC H
Sbjct: 466 RLRCDH 471
>NP_115812
          Length = 812

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  AARLRCQH 9
          +ARL C H
Sbjct: 11 SARLECDH 18
>NP_001157617
          Length = 812

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  AARLRCQH 9
          +ARL C H
Sbjct: 11 SARLECDH 18
>NP_001399
          Length = 2923

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RLRCQ
Sbjct: 140 APRLRCQ 146
>NP_001157616
          Length = 812

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  AARLRCQH 9
          +ARL C H
Sbjct: 11 SARLECDH 18
>XP_005266254
          Length = 812

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  AARLRCQH 9
          +ARL C H
Sbjct: 11 SARLECDH 18
>XP_006712967
          Length = 298

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  AARLRC 7
          AARLRC
Sbjct: 29 AARLRC 34
>XP_006710468
          Length = 2916

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RLRCQ
Sbjct: 140 APRLRCQ 146
>XP_005270637
          Length = 2921

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RLRCQ
Sbjct: 140 APRLRCQ 146
>NP_001167579
          Length = 979

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   VAARLRCQH 9
           VAAR  C H
Sbjct: 607 VAARKTCHH 615
>NP_057301
          Length = 543

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ARLRCQH 9
           ARL C+H
Sbjct: 490 ARLNCKH 496
>NP_004632
          Length = 1027

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>NP_001182555
          Length = 1068

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>NP_004180
          Length = 240

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  AARLRCQH 9
          A RLR QH
Sbjct: 61 AKRLRAQH 68
>NP_001171619
          Length = 582

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  ARLRCQ 8
          AR+RCQ
Sbjct: 67 ARIRCQ 72
>NP_005928
          Length = 1093

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>NP_001271431
          Length = 222

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   RLRCQH 9
           RLRC H
Sbjct: 102 RLRCTH 107
>XP_006725391
          Length = 992

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_006725389
          Length = 1067

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_006725388
          Length = 1094

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_006725387
          Length = 1120

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_005257438
          Length = 992

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_006721974
          Length = 1067

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_006721973
          Length = 1094

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_005257436
          Length = 1120

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 60 AARVRCE 66
>XP_005252669
          Length = 584

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_006717572
          Length = 1003

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_005252667
          Length = 1052

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_005252666
          Length = 1057

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_005252665
          Length = 1068

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_005252663
          Length = 1084

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_005252662
          Length = 1084

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  AARLRCQ 8
          AAR+RC+
Sbjct: 77 AARVRCE 83
>XP_005262946
          Length = 583

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  ARLRCQ 8
          AR+RCQ
Sbjct: 67 ARIRCQ 72
>XP_005262945
          Length = 612

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  ARLRCQ 8
          AR+RCQ
Sbjct: 67 ARIRCQ 72
>NP_008872
          Length = 466

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   AARLRCQH 9
           A RLR QH
Sbjct: 157 AERLRMQH 164
>NP_000337
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   AARLRCQH 9
           A RLR QH
Sbjct: 158 AERLRVQH 165
>NP_071899
          Length = 414

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   AARLRCQH 9
           A RLR QH
Sbjct: 121 AERLRVQH 128
>NP_001120965
          Length = 1863

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1331 IEARLRC 1337
>NP_066187
          Length = 1872

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1340 IEARLRC 1346
>NP_001139
          Length = 3957

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1340 IEARLRC 1346
>NP_055897
          Length = 842

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   VAARLRC 7
           VAA LRC
Sbjct: 356 VAASLRC 362
>NP_079494
          Length = 244

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   ARLRCQH 9
           AR+ C+H
Sbjct: 123 ARMSCEH 129
>NP_060889
          Length = 384

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   AARLRCQH 9
           A RLR QH
Sbjct: 138 AERLRVQH 145
>NP_055402
          Length = 446

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   AARLRCQH 9
           A RLR QH
Sbjct: 155 AERLRVQH 162
>NP_113627
          Length = 388

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   AARLRCQH 9
           A RLR QH
Sbjct: 98  AERLRLQH 105
>XP_005267208
          Length = 211

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   ARLRCQH 9
           AR+ C+H
Sbjct: 123 ARMSCEH 129
>XP_006714257
          Length = 4145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1349 IEARLRC 1355
>XP_006714256
          Length = 1901

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1369 IEARLRC 1375
>XP_006714255
          Length = 1970

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1357 IEARLRC 1363
>XP_005263005
          Length = 2019

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1339 IEARLRC 1345
>XP_006714254
          Length = 2049

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1369 IEARLRC 1375
>XP_006714253
          Length = 2069

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1369 IEARLRC 1375
>XP_005263002
          Length = 4072

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1307 IEARLRC 1313
>XP_005262999
          Length = 4147

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1351 IEARLRC 1357
>XP_006714252
          Length = 4153

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1357 IEARLRC 1363
>XP_006714251
          Length = 4165

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1369 IEARLRC 1375
>XP_006714250
          Length = 4190

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    VAARLRC 7
            + ARLRC
Sbjct: 1394 IEARLRC 1400
>NP_000042
          Length = 3056

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RL+CQ
Sbjct: 112 APRLKCQ 118
>NP_055213
          Length = 416

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 4   RLRCQ 8
           RLRCQ
Sbjct: 405 RLRCQ 409
>NP_001191169
          Length = 515

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 4   RLRCQ 8
           RLRCQ
Sbjct: 112 RLRCQ 116
>NP_001078906
          Length = 447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   VAARLRCQH 9
           VAA + C+H
Sbjct: 157 VAAIVHCKH 165
>NP_115871
          Length = 1537

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   VAARLRCQH 9
           VAA   C+H
Sbjct: 173 VAAATNCKH 181
>NP_114143
          Length = 508

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 4   RLRCQ 8
           RLRCQ
Sbjct: 105 RLRCQ 109
>XP_005259717
          Length = 1738

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   VAARLRCQH 9
           VAA   C+H
Sbjct: 173 VAAATNCKH 181
>XP_005259716
          Length = 1738

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   VAARLRCQH 9
           VAA   C+H
Sbjct: 173 VAAATNCKH 181
>XP_005255186
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3  ARLRCQH 9
          ARL C H
Sbjct: 40 ARLPCSH 46
>XP_006718907
          Length = 3050

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RL+CQ
Sbjct: 112 APRLKCQ 118
>XP_006718906
          Length = 3056

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RL+CQ
Sbjct: 112 APRLKCQ 118
>XP_005271619
          Length = 3056

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RL+CQ
Sbjct: 112 APRLKCQ 118
>XP_005271618
          Length = 3056

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AARLRCQ 8
           A RL+CQ
Sbjct: 112 APRLKCQ 118
>NP_777563
          Length = 245

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query: 3  ARLRCQH 9
          ARL C H
Sbjct: 31 ARLPCSH 37
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.344    0.134    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 565,304
Number of extensions: 535
Number of successful extensions: 93
Number of sequences better than 10000.0: 93
Number of HSP's gapped: 93
Number of HSP's successfully gapped: 93
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.8 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package