Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 869 XP_006717990 19 869 XP_006717989 19 869 NP_004215 17 4312 NP_085130 16 5631 XP_005266053 16 5631 XP_005266052 16 5631 XP_005266051 16 5631 NP_996898 16 7355 NP_036372 16 7355 XP_006719375 16 7355 XP_006719374 16 7355 XP_006719373 16 7355 XP_006719372 16 7355 XP_006719371 16 7355 XP_005247321 16 7355 XP_006713623 16 7355 NP_001088 16 7355 NP_055660 15 9605 NP_954868 15 9605 NP_954869 15 9605 NP_001277153 15 9605 NP_954870 15 9605 NP_055979 15 9605 NP_003736 15 9605 NP_937816 15 9605 NP_067003 15 9605 NP_001181939 15 9605 NP_937817 15 9605 NP_001274532 15 9605 NP_201588 15 9605 NP_201570 15 9605 NP_201569 15 9605 NP_001070649 15 9605 NP_003434 15 9605 NP_003663 15 9605 NP_003662 15 9605 NP_954863 15 9605 XP_005252345 15 9605 XP_005252344 15 9605 XP_005252343 15 9605 XP_006715685 15 9605 XP_005271353 15 9605 XP_005271351 15 9605 XP_005246043 15 9605 XP_005245848 15 9605 XP_005245847 15 9605 NP_570141 15 9605 NP_001135440 15 9605>NP_000305 Length = 403 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAAIHFKAG 9 VAAIH KAG Sbjct: 119 VAAIHCKAG 127>XP_006717990 Length = 175 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAAIHFKAG 9 VAAIH KAG Sbjct: 104 VAAIHCKAG 112>XP_006717989 Length = 388 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAAIHFKAG 9 VAAIH KAG Sbjct: 104 VAAIHCKAG 112>NP_004215 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AAIHFKA 8 A++HFKA Sbjct: 442 ASVHFKA 448>NP_085130 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 AAIH +AG Sbjct: 699 AAIHSRAG 706>XP_005266053 Length = 704 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 AAIH +AG Sbjct: 674 AAIHSRAG 681>XP_005266052 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 AAIH +AG Sbjct: 682 AAIHSRAG 689>XP_005266051 Length = 721 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 AAIH +AG Sbjct: 691 AAIHSRAG 698>NP_996898 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 A ++FKAG Sbjct: 776 AQVYFKAG 783>NP_036372 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAAIHFKAG 9 V A+H KAG Sbjct: 145 VDALHTKAG 153>XP_006719375 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAAIHFKAG 9 V A+H KAG Sbjct: 86 VDALHTKAG 94>XP_006719374 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAAIHFKAG 9 V A+H KAG Sbjct: 145 VDALHTKAG 153>XP_006719373 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAAIHFKAG 9 V A+H KAG Sbjct: 145 VDALHTKAG 153>XP_006719372 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAAIHFKAG 9 V A+H KAG Sbjct: 145 VDALHTKAG 153>XP_006719371 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAAIHFKAG 9 V A+H KAG Sbjct: 145 VDALHTKAG 153>XP_005247321 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 A ++FKAG Sbjct: 727 AQVYFKAG 734>XP_006713623 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAIHFKAG 9 A ++FKAG Sbjct: 759 AQVYFKAG 766>NP_001088 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 HFKAG 9 HFKAG Sbjct: 165 HFKAG 169>NP_055660 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAAIHF 6 VAA+HF Sbjct: 356 VAALHF 361>NP_954868 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 315 IVAIHCKGG 323>NP_954869 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 295 IVAIHCKGG 303>NP_001277153 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 195 IVAIHCKGG 203>NP_954870 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 333 IVAIHCKGG 341>NP_055979 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IHFKAG 9 +H+KAG Sbjct: 778 LHYKAG 783>NP_003736 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IHFKAG 9 +HF+AG Sbjct: 128 VHFQAG 133>NP_937816 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 AIH K+G Sbjct: 240 AIHIKSG 246>NP_067003 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 AIH K+G Sbjct: 245 AIHIKSG 251>NP_001181939 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 AIH K+G Sbjct: 194 AIHIKSG 200>NP_937817 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 AIH K+G Sbjct: 240 AIHIKSG 246>NP_001274532 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VAAIHFKA 8 V +HFKA Sbjct: 30 VDGVHFKA 37>NP_201588 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 311 AVHCKAG 317>NP_201570 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 275 AVHCKAG 281>NP_201569 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 275 AVHCKAG 281>NP_001070649 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 274 AVHCKAG 280>NP_003434 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VAAIHFKA 8 V +HFKA Sbjct: 30 VDGVHFKA 37>NP_003663 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 275 AVHCKAG 281>NP_003662 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 311 AVHCKAG 317>NP_954863 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 315 IVAIHCKGG 323>XP_005252345 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 274 AVHCKAG 280>XP_005252344 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 311 AVHCKAG 317>XP_005252343 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 311 AVHCKAG 317>XP_006715685 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VAAIHF 6 VAA+HF Sbjct: 210 VAALHF 215>XP_005271353 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 276 AVHCKAG 282>XP_005271351 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AIHFKAG 9 A+H KAG Sbjct: 276 AVHCKAG 282>XP_005246043 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VAAIHFKA 8 V +HFKA Sbjct: 30 VDGVHFKA 37>XP_005245848 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IHFKAG 9 +H+KAG Sbjct: 575 LHYKAG 580>XP_005245847 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IHFKAG 9 +H+KAG Sbjct: 758 LHYKAG 763>NP_570141 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 238 IVAIHCKGG 246>NP_001135440 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VAAIHFKAG 9 + AIH K G Sbjct: 204 IVAIHCKGG 212Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 510,735 Number of extensions: 655 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |