Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 21 229 XP_006713721 21 229 XP_005250923 19 665 NP_055194 19 665 NP_001167535 17 2528 NP_001167534 17 2528 NP_001167536 17 2528 NP_056934 17 2528 NP_075598 17 2528 NP_001167538 17 2528 XP_006716372 17 2528 XP_006716371 17 2528 XP_006716370 17 2528 XP_006716369 17 2528 XP_006716368 17 2528 XP_006716367 17 2528 XP_006716366 17 2528 NP_001608 16 5631 NP_001035519 16 5631 NP_001171984 16 5631 NP_001171983 16 5631 NP_071940 16 5631 NP_059522 16 5631 NP_059516 16 5631 XP_005268066 16 5631 XP_005266415 16 5631 XP_005266414 16 5631 NP_065866 16 7355 NP_116586 16 7355 NP_004095 16 7355 NP_001171809 16 7355 NP_001098713 16 7355 NP_065817 16 7355 NP_998765 16 7355 XP_005254329 16 7355 NP_061744 16 7355 NP_114478 16 7355 NP_006260 15 9605 NP_009210 15 9605 NP_001012496 15 9605 NP_525022 15 9605 NP_001268695 15 9605 NP_690873 15 9605 NP_001166244 15 9605 NP_872272 15 9605 NP_055401 15 9605 NP_071365 15 9605 NP_055061 15 9605 NP_004430 15 9605 NP_001268694 15 9605 NP_001268696 15 9605 XP_006724446 15 9605 XP_005260285 15 9605 XP_006723916 15 9605 XP_005258592 15 9605 XP_006723057 15 9605 XP_005256994 15 9605 XP_005256993 15 9605 XP_005256992 15 9605 XP_006721697 15 9605 XP_006721696 15 9605 XP_005256991 15 9605>NP_006209 Length = 1068 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYVSVNIRD 9 TYV+VNIRD Sbjct: 342 TYVNVNIRD 350>XP_006713721 Length = 1068 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYVSVNIRD 9 TYV+VNIRD Sbjct: 342 TYVNVNIRD 350>XP_005250923 Length = 500 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TYVSVNIRD 9 +Y+SVN+RD Sbjct: 462 SYISVNLRD 470>NP_055194 Length = 500 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TYVSVNIRD 9 +Y+SVN+RD Sbjct: 462 SYISVNLRD 470>NP_001167535 Length = 812 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 104 TYFSVNVSD 112>NP_001167534 Length = 820 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>NP_001167536 Length = 820 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>NP_056934 Length = 820 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>NP_075598 Length = 822 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>NP_001167538 Length = 853 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 145 TYFSVNVSD 153>XP_006716372 Length = 824 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 104 TYFSVNVSD 112>XP_006716371 Length = 830 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>XP_006716370 Length = 830 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>XP_006716369 Length = 830 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>XP_006716368 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>XP_006716367 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>XP_006716366 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY SVN+ D Sbjct: 112 TYFSVNVSD 120>NP_001608 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY+ VN+ D Sbjct: 439 TYLRVNVAD 447>NP_001035519 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVSVN Sbjct: 523 TYVSVN 528>NP_001171984 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY+ VN+ D Sbjct: 455 TYLRVNVAD 463>NP_001171983 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY+ VN+ D Sbjct: 439 TYLRVNVAD 447>NP_071940 Length = 938 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TYVSVNIR 8 TY S+NI+ Sbjct: 441 TYCSINIK 448>NP_059522 Length = 643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY+ VN+ D Sbjct: 439 TYLRVNVAD 447>NP_059516 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 TY+ VN+ D Sbjct: 439 TYLRVNVAD 447>XP_005268066 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TYVSVNIR 8 TY S+NI+ Sbjct: 675 TYCSINIK 682>XP_005266415 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVSVN Sbjct: 523 TYVSVN 528>XP_005266414 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVSVN Sbjct: 523 TYVSVN 528>NP_065866 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 514 TYVSIN 519>NP_116586 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 514 TYVSIN 519>NP_004095 Length = 2511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YVSVNIRD 9 Y S+N RD Sbjct: 1568 YASLNFRD 1575>NP_001171809 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 504 TYVSIN 509>NP_001098713 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 504 TYVSIN 509>NP_065817 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 504 TYVSIN 509>NP_998765 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YVSVNIR 8 Y SVN+R Sbjct: 496 YTSVNVR 502>XP_005254329 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YVSVNIR 8 Y SVN+R Sbjct: 128 YTSVNVR 134>NP_061744 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 503 TYVSIN 508>NP_114478 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TYVSVN 6 TYVS+N Sbjct: 503 TYVSIN 508>NP_006260 Length = 2156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TYVSVNI 7 TYV VN+ Sbjct: 1332 TYVPVNV 1338>NP_009210 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 YVSVNIRD 9 YV +N+ D Sbjct: 307 YVDINVTD 314>NP_001012496 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 YVSVNIRD 9 YV +N+ D Sbjct: 307 YVDINVTD 314>NP_525022 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 240 YVSVNV 245>NP_001268695 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 457 YVSVNV 462>NP_690873 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 T S+NIRD Sbjct: 517 TPTSLNIRD 525>NP_001166244 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 T S+NIRD Sbjct: 529 TPTSLNIRD 537>NP_872272 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 457 YVSVNV 462>NP_055401 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TYVSVNIR 8 TYV+ N+R Sbjct: 102 TYVTKNLR 109>NP_071365 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VSVNIRD 9 +SVNI+D Sbjct: 356 ISVNIQD 362>NP_055061 Length = 3014 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TYVSVNIRD 9 TY++V ++D Sbjct: 337 TYITVLVKD 345>NP_004430 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 457 YVSVNV 462>NP_001268694 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 457 YVSVNV 462>NP_001268696 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 457 YVSVNV 462>XP_006724446 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TYVSVNIRD 9 TY++V ++D Sbjct: 337 TYITVLVKD 345>XP_005260285 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VSVNIRD 9 +SVNI+D Sbjct: 350 ISVNIQD 356>XP_006723916 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VSVNIRD 9 +SVNI+D Sbjct: 376 ISVNIQD 382>XP_005258592 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TYVSVNIRD 9 T S+NIRD Sbjct: 520 TPTSLNIRD 528>XP_006723057 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 YVSVNIRD 9 YV +N+ D Sbjct: 143 YVDINVTD 150>XP_005256994 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 248 YVSVNV 253>XP_005256993 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 159 YVSVNV 164>XP_005256992 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 159 YVSVNV 164>XP_006721697 Length = 1625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 248 YVSVNV 253>XP_006721696 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 248 YVSVNV 253>XP_005256991 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YVSVNI 7 YVSVN+ Sbjct: 248 YVSVNV 253Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.134 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 367,738 Number of extensions: 608 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |