Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002221 20 509 NP_001895 20 509 NP_001091680 20 509 NP_068831 20 509 NP_001091679 20 509 XP_006721941 20 509 XP_006721940 20 509 XP_006721939 20 509 XP_006721938 20 509 XP_006721937 20 509 XP_006721936 20 509 XP_006721935 20 509 XP_006721934 20 509 XP_005257370 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_001257903 17 3301 XP_006721269 17 3301 NP_000229 16 7355 NP_001191727 16 7355 NP_742053 16 7355 NP_742054 16 7355 NP_059984 16 7355 NP_110406 16 7355 NP_001265848 16 7355 NP_001265849 16 7355 NP_775115 16 7355 XP_006724893 16 7355 XP_005274763 16 7355 XP_006724892 16 7355 XP_005274762 16 7355 XP_006716040 16 7355 NP_079455 15 9605 NP_003861 15 9605 NP_001192136 15 9605 NP_919231 15 9605 NP_001192135 15 9605 NP_066549 15 9605 NP_055099 15 9605 NP_001014839 15 9605 NP_115618 15 9605 XP_005261221 15 9605 XP_005255041 15 9605 XP_006713726 15 9605 XP_005273222 15 9605 XP_006711450 15 9605 XP_005273221 15 9605 NP_001014841 15 9605>NP_002221 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 653 TYAAAVLFR 661>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 653 TYAAAVLFR 661>NP_068831 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 653 TYAAAVLFR 661>XP_006721941 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>XP_006721940 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>XP_006721939 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>XP_006721938 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>XP_006721937 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>XP_006721936 Length = 745 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 643 TYAAAVLFR 651>XP_006721935 Length = 762 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 660 TYAAAVLFR 668>XP_006721934 Length = 783 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 681 TYAAAVLFR 689>XP_005257370 Length = 783 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 681 TYAAAVLFR 689>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 653 TYAAAVLFR 661>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 646 TYAAAVLFR 654>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 646 TYAAAVLFR 654>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TYAAAVLFQ 9 TYAAAVLF+ Sbjct: 653 TYAAAVLFR 661>NP_001257903 Length = 5121 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TYAAAVLFQ 9 TYAA V+F+ Sbjct: 4805 TYAAKVIFR 4813>XP_006721269 Length = 5138 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TYAAAVLFQ 9 TYAA V+F+ Sbjct: 4822 TYAAKVIFR 4830>NP_000229 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 545 YGAAVLF 551>NP_001191727 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 205 YGAAVLF 211>NP_742053 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 545 YGAAVLF 551>NP_742054 Length = 819 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 205 YGAAVLF 211>NP_059984 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1301 TYAVRVLF 1308>NP_110406 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 396 YGAAVLF 402>NP_001265848 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 396 YGAAVLF 402>NP_001265849 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 273 YGAAVLF 279>NP_775115 Length = 905 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 396 YGAAVLF 402>XP_006724893 Length = 1719 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1301 TYAVRVLF 1308>XP_005274763 Length = 1789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1219 TYAVRVLF 1226>XP_006724892 Length = 1841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1271 TYAVRVLF 1278>XP_005274762 Length = 1853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1283 TYAVRVLF 1290>XP_006716040 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YAAAVLF 8 Y AAVLF Sbjct: 545 YGAAVLF 551>NP_079455 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1319 TYAMRVLF 1326>NP_003861 Length = 1657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYAAAVLFQ 9 TY A ++FQ Sbjct: 984 TYLAKLIFQ 992>NP_001192136 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAAAVLFQ 9 YAA VLF+ Sbjct: 326 YAAFVLFR 333>NP_919231 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAAAVLFQ 9 YAA VLF+ Sbjct: 366 YAAFVLFR 373>NP_001192135 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAAAVLFQ 9 YAA VLF+ Sbjct: 366 YAAFVLFR 373>NP_066549 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TYAAAVLF 8 T+A A+LF Sbjct: 118 THAVAILF 125>NP_055099 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAAAVLF 8 +AAA+LF Sbjct: 596 FAAAILF 602>NP_001014839 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAAAVLF 8 +AAA+LF Sbjct: 596 FAAAILF 602>NP_115618 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1326 TYAMRVLF 1333>XP_005261221 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAAAVLFQ 9 YAA VLF+ Sbjct: 248 YAAFVLFR 255>XP_005255041 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TYAAAVLFQ 9 TY A ++FQ Sbjct: 984 TYLAKLIFQ 992>XP_006713726 Length = 1910 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1344 TYAMRVLF 1351>XP_005273222 Length = 1823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1334 TYAMRVLF 1341>XP_006711450 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1334 TYAMRVLF 1341>XP_005273221 Length = 1974 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TYAAAVLF 8 TYA VLF Sbjct: 1334 TYAMRVLF 1341>NP_001014841 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAAAVLF 8 +AAA+LF Sbjct: 579 FAAAILF 585Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.131 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 341,875 Number of extensions: 612 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |