Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 18 1482 NP_001138390 18 1482 NP_001138386 18 1482 NP_001138387 18 1482 NP_000132 18 1482 NP_075259 18 1482 NP_001138388 18 1482 NP_001138391 18 1482 NP_001138385 18 1482 NP_075418 18 1482 NP_001156685 18 1482 NP_000133 18 1482 NP_075254 18 1482 XP_006717776 18 1482 XP_006717775 18 1482 XP_006717774 18 1482 XP_006717773 18 1482 XP_006717772 18 1482 XP_006717771 18 1482 XP_006713936 18 1482 XP_006713935 18 1482 XP_006713934 18 1482 XP_006713933 18 1482 XP_006713932 18 1482 XP_006713931 18 1482 NP_000213 17 3301 NP_001087241 17 3301 XP_005265799 17 3301 XP_005265798 17 3301 XP_005265797 17 3301 NP_002011 17 4312 NP_891555 17 4312 NP_065681 17 4312 NP_066124 17 4312 NP_002600 17 4312 NP_002244 17 4312 NP_075252 17 4312 NP_998812 17 4312 NP_002002 17 4312 NP_002010 17 4312 XP_006717999 17 4312 XP_005265895 17 4312 XP_005265894 17 4312 XP_005268521 17 4312 NP_001136245 16 7355 NP_001136239 16 7355 NP_001136236 16 7355 NP_001136244 16 7355 NP_001136238 16 7355 NP_001136240 16 7355 NP_001136243 16 7355 NP_001136242 16 7355 NP_001136235 16 7355 NP_001136237 16 7355 NP_001136241 16 7355 NP_149045 16 7355 NP_006173 16 7355 NP_001014796 16 7355 NP_004110 16 7355 NP_006284 16 7355 XP_006718013 16 7355 XP_006711407 16 7355 XP_005245278 16 7355 NP_001161846 15 9605 NP_001161849 15 9605 NP_001161848 15 9605 NP_001239257 15 9605 NP_055624 15 9605 NP_001161847 15 9605 XP_006715351 15 9605 XP_006715350 15 9605 XP_006715349 15 9605 XP_005249561 15 9605>NP_001138389 Length = 705 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 396 VTVAVKML 403>NP_001138390 Length = 704 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 395 VTVAVKML 402>NP_001138386 Length = 709 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 400 VTVAVKML 407>NP_001138387 Length = 707 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 423 VTVAVKML 430>NP_000132 Length = 821 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 512 VTVAVKML 519>NP_075259 Length = 822 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 513 VTVAVKML 520>NP_001138388 Length = 706 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 397 VTVAVKML 404>NP_001138391 Length = 680 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 424 VTVAVKML 431>NP_001138385 Length = 769 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 513 VTVAVKML 520>NP_075418 Length = 732 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 423 VTVAVKML 430>NP_001156685 Length = 808 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 505 VTVAVKML 512>NP_000133 Length = 806 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 503 VTVAVKML 510>NP_075254 Length = 694 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 391 VTVAVKML 398>XP_006717776 Length = 806 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 531 VTVAVKML 538>XP_006717775 Length = 726 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 417 VTVAVKML 424>XP_006717774 Length = 752 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 443 VTVAVKML 450>XP_006717773 Length = 807 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 532 VTVAVKML 539>XP_006717772 Length = 838 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 529 VTVAVKML 536>XP_006717771 Length = 839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 530 VTVAVKML 537>XP_006713936 Length = 807 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 503 VTVAVKML 510>XP_006713935 Length = 807 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 504 VTVAVKML 511>XP_006713934 Length = 809 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 505 VTVAVKML 512>XP_006713933 Length = 810 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 506 VTVAVKML 513>XP_006713932 Length = 810 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 507 VTVAVKML 514>XP_006713931 Length = 811 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 VTVAVKML Sbjct: 507 VTVAVKML 514>NP_000213 Length = 976 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 +TVAVKML Sbjct: 618 MTVAVKML 625>NP_001087241 Length = 972 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 +TVAVKML Sbjct: 614 MTVAVKML 621>XP_005265799 Length = 973 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 +TVAVKML Sbjct: 615 MTVAVKML 622>XP_005265798 Length = 976 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 +TVAVKML Sbjct: 619 MTVAVKML 626>XP_005265797 Length = 977 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VTVAVKML 9 +TVAVKML Sbjct: 619 MTVAVKML 626>NP_002011 Length = 1298 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 875 TVAVKML 881>NP_891555 Length = 1363 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 875 TVAVKML 881>NP_065681 Length = 1072 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 754 TVAVKML 760>NP_066124 Length = 1114 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 754 TVAVKML 760>NP_002600 Length = 1106 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVTVAVKML 9 T+ VAVKML Sbjct: 628 TMKVAVKML 636>NP_002244 Length = 1356 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 864 TVAVKML 870>NP_075252 Length = 762 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 459 TVAVKML 465>NP_998812 Length = 802 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 499 TVAVKML 505>NP_002002 Length = 802 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 499 TVAVKML 505>NP_002010 Length = 1338 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 857 TVAVKML 863>XP_006717999 Length = 1207 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 847 TVAVKML 853>XP_005265895 Length = 802 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 499 TVAVKML 505>XP_005265894 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVAVKML 9 TVAVKML Sbjct: 531 TVAVKML 537>XP_005268521 Length = 1042 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVTVAVKML 9 T+ VAVKML Sbjct: 564 TMKVAVKML 572>NP_001136245 Length = 1932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 780 TLTLAIKVL 788>NP_001136239 Length = 1915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 765 TLTLAIKVL 773>NP_001136236 Length = 1957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 802 TLTLAIKVL 810>NP_001136244 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 802 TLTLAIKVL 810>NP_001136238 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 802 TLTLAIKVL 810>NP_001136240 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 780 TLTLAIKVL 788>NP_001136243 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 807 TLTLAIKVL 815>NP_001136242 Length = 1539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 802 TLTLAIKVL 810>NP_001136235 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 807 TLTLAIKVL 815>NP_001136237 Length = 1886 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 731 TLTLAIKVL 739>NP_001136241 Length = 1790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 814 TLTLAIKVL 822>NP_149045 Length = 1955 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 802 TLTLAIKVL 810>NP_006173 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVAVKML 9 V VAVKML Sbjct: 603 VLVAVKML 610>NP_001014796 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVAVKML 9 V VAVKML Sbjct: 603 VLVAVKML 610>NP_004110 Length = 993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVTVAVKML 9 ++ VAVKML Sbjct: 638 SIQVAVKML 646>NP_006284 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVAVKML 9 V VAVKML Sbjct: 545 VKVAVKML 552>XP_006718013 Length = 1778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TVTVAVKML 9 T+T+A+K+L Sbjct: 802 TLTLAIKVL 810>XP_006711407 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVAVKML 9 V VAVKML Sbjct: 603 VLVAVKML 610>XP_005245278 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVAVKML 9 V VAVKML Sbjct: 615 VLVAVKML 622>NP_001161846 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 697 TLTVAVK 703>NP_001161849 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 706 TLTVAVK 712>NP_001161848 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 661 TLTVAVK 667>NP_001239257 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 117 TLTVAVK 123>NP_055624 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 706 TLTVAVK 712>NP_001161847 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 706 TLTVAVK 712>XP_006715351 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 554 TLTVAVK 560>XP_006715350 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 768 TLTVAVK 774>XP_006715349 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 735 TLTVAVK 741>XP_005249561 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTVAVK 7 T+TVAVK Sbjct: 768 TLTVAVK 774Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.127 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 215,591 Number of extensions: 283 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |