Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 509 NP_001035739 17 4312 NP_009030 17 4312 NP_004291 17 4312 NP_001264988 17 4312 XP_006714753 17 4312 NP_005947 16 5631 NP_003592 16 5631 NP_001186692 16 5631 NP_852114 16 5631 NP_056041 16 5631 NP_001230332 16 5631 XP_006720933 16 5631 XP_005255273 16 5631 XP_005255272 16 5631 XP_005255271 16 5631 XP_005255270 16 5631 XP_005255268 16 5631 XP_005255267 16 5631 NP_114091 16 7355 NP_065107 16 7355 NP_061914 16 7355 NP_077741 16 7355 NP_001932 16 7355 XP_005256139 16 7355 XP_005256138 16 7355 XP_005256137 16 7355 XP_006719055 16 7355 XP_005253773 16 7355 XP_005267093 16 7355 XP_005267092 16 7355 NP_001191890 15 9605 NP_002576 15 9605 NP_001191892 15 9605 NP_006186 15 9605 NP_073744 15 9605 NP_001030611 15 9605 NP_002577 15 9605 NP_004738 15 9605 XP_006725186 15 9605 XP_006725185 15 9605 XP_006725184 15 9605 XP_006725183 15 9605 XP_006718120 15 9605 XP_006718119 15 9605 XP_006718118 15 9605 XP_005270333 15 9605 XP_005252192 15 9605 XP_006717195 15 9605 XP_006717194 15 9605 XP_006717193 15 9605 XP_005245286 15 9605 XP_005245285 15 9605 NP_064584 15 9605 NP_001017415 15 9605 NP_003359 15 9605 NP_001017416 15 9605>NP_004351 Length = 882 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVTDQNVNK 9 TVTDQN NK Sbjct: 251 TVTDQNDNK 259Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVTD N N Sbjct: 364 TVTDTNDN 371>NP_001035739 Length = 112 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTDQNVNK 9 VTDQN+++ Sbjct: 31 VTDQNISE 38>NP_009030 Length = 158 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTDQNVNK 9 VTDQN+++ Sbjct: 31 VTDQNISE 38>NP_004291 Length = 158 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTDQNVNK 9 VTDQN+++ Sbjct: 31 VTDQNISE 38>NP_001264988 Length = 333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TV DQNV+ Sbjct: 216 TVADQNVS 223>XP_006714753 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TV DQNV+ Sbjct: 173 TVADQNVS 180>NP_005947 Length = 935 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TVTDQNVNK 9 T+TD+ +N+ Sbjct: 509 TLTDEEINR 517>NP_003592 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 + DQN+NK Sbjct: 637 LVDQNLNK 644>NP_001186692 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VTDQNV 7 VTDQNV Sbjct: 475 VTDQNV 480>NP_852114 Length = 205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVTDQNVNK 9 TVT QN+N+ Sbjct: 88 TVTMQNLNE 96>NP_056041 Length = 1053 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>NP_001230332 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_006720933 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_005255273 Length = 884 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_005255272 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_005255271 Length = 998 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_005255270 Length = 1035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_005255268 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>XP_005255267 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTDQNVN 8 TVT+QN N Sbjct: 38 TVTEQNRN 45>NP_114091 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVT NVN Sbjct: 157 TVTGDNVN 164>NP_065107 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TVTDQNVN 8 ++TDQ+VN Sbjct: 184 SLTDQDVN 191>NP_061914 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VTDQNVNK 9 VTD +NK Sbjct: 334 VTDHRINK 341>NP_077741 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVTD N N Sbjct: 344 TVTDSNDN 351>NP_001932 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVTD N N Sbjct: 344 TVTDSNDN 351>XP_005256139 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVT NVN Sbjct: 157 TVTGDNVN 164>XP_005256138 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVT NVN Sbjct: 157 TVTGDNVN 164>XP_005256137 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TVTDQNVN 8 TVT NVN Sbjct: 157 TVTGDNVN 164>XP_006719055 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TVTDQNVN 8 ++TDQ+VN Sbjct: 184 SLTDQDVN 191>XP_005253773 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TVTDQNVN 8 ++TDQ+VN Sbjct: 184 SLTDQDVN 191>XP_005267093 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VTDQNVNK 9 VTD +NK Sbjct: 192 VTDHRINK 199>XP_005267092 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VTDQNVNK 9 VTD +NK Sbjct: 298 VTDHRINK 305>NP_001191890 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 52 TITDQSLDE 60>NP_002576 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 52 TITDQSLDE 60>NP_001191892 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 52 TITDQSLDE 60>NP_006186 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 55 TITDQSLDE 63>NP_073744 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VTDQNVN 8 VTD N+N Sbjct: 369 VTDMNLN 375>NP_001030611 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VTDQNVN 8 VTD N+N Sbjct: 356 VTDMNLN 362>NP_002577 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 62 TITDQSLDE 70>NP_004738 Length = 1919 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006725186 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006725185 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006725184 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006725183 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006718120 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006718119 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_006718118 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_005270333 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTDQNVNK 9 +TDQ VN+ Sbjct: 137 LTDQQVNE 144>XP_005252192 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VTDQNVN 8 VTD N+N Sbjct: 358 VTDMNLN 364>XP_006717195 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 55 TITDQSLDE 63>XP_006717194 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 55 TITDQSLDE 63>XP_006717193 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 55 TITDQSLDE 63>XP_005245286 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 52 TITDQSLDE 60>XP_005245285 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVTDQNVNK 9 T+TDQ++++ Sbjct: 52 TITDQSLDE 60>NP_064584 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DQNVNK 9 DQNVN+ Sbjct: 247 DQNVNE 252>NP_001017415 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTDQNVNK 9 TVT NVN+ Sbjct: 402 TVTPVNVNE 410>NP_003359 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTDQNVNK 9 TVT NVN+ Sbjct: 402 TVTPVNVNE 410>NP_001017416 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTDQNVNK 9 TVT NVN+ Sbjct: 402 TVTPVNVNE 410Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.112 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,260 Number of extensions: 718 Number of successful extensions: 58 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |