Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 390 NP_858045 20 390 NP_006525 20 390 NP_001167559 20 390 NP_006531 19 869 XP_005251190 19 869 XP_005251188 19 869 XP_005251189 19 869 XP_005251187 19 869 XP_005251186 19 869 XP_005251185 19 869 NP_001017368 17 4312 NP_777638 16 5631 NP_695001 16 7355 NP_542138 16 7355 XP_005260723 16 7355 XP_006723606 16 7355 NP_000436 15 9605 NP_958780 15 9605 NP_958781 15 9605 NP_958785 15 9605 NP_958783 15 9605 NP_958786 15 9605 NP_002435 15 9605 NP_003370 15 9605 NP_001104547 15 9605 NP_001319 15 9605 NP_001012632 15 9605 NP_001247421 15 9605 NP_001247423 15 9605 NP_958782 15 9605 NP_001247422 15 9605 NP_001171588 15 9605 NP_958784 15 9605 NP_002897 15 9605 NP_001247425 15 9605 NP_004888 15 9605 NP_149989 15 9605 NP_001247424 15 9605 NP_001272320 15 9605 NP_076991 15 9605 XP_005262326 15 9605 XP_005256858 15 9605 XP_005256244 15 9605 XP_006721357 15 9605 XP_006721356 15 9605 XP_006718141 15 9605 XP_005251041 15 9605 XP_005251040 15 9605 XP_006716653 15 9605 XP_006716652 15 9605 XP_005251039 15 9605 XP_005251038 15 9605 XP_005251036 15 9605 XP_005251037 15 9605 XP_005251035 15 9605 XP_006716651 15 9605 XP_005251034 15 9605 XP_005251033 15 9605 XP_005272320 15 9605 XP_005272319 15 9605 XP_005272318 15 9605 NP_112583 15 9605>NP_001167558 Length = 1423 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TVRQ+RQIK Sbjct: 75 TVRQIRQIK 83>NP_858045 Length = 1424 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TVRQ+RQIK Sbjct: 75 TVRQIRQIK 83>NP_006525 Length = 1420 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TVRQ+RQIK Sbjct: 75 TVRQIRQIK 83>NP_001167559 Length = 1415 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TVRQ+RQIK Sbjct: 75 TVRQIRQIK 83>NP_006531 Length = 1464 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>XP_005251190 Length = 1395 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>XP_005251188 Length = 1464 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>XP_005251189 Length = 1464 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>XP_005251187 Length = 1464 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>XP_005251186 Length = 1464 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>XP_005251185 Length = 1464 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+RQIK Sbjct: 76 TVKQIRQIK 84>NP_001017368 Length = 363 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TVRQLRQI 8 TVRQL++I Sbjct: 254 TVRQLKEI 261>NP_777638 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 TVRQ+R+ K Sbjct: 381 TVRQVRESK 389>NP_695001 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 230 MRQLQQVK 237>NP_542138 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 229 MRQLQQVK 236>XP_005260723 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 195 MRQLQQVK 202>XP_006723606 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 177 MRQLQQVK 184>NP_000436 Length = 4574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1943 TLRQRRQVE 1951>NP_958780 Length = 4533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1902 TLRQRRQVE 1910>NP_958781 Length = 4525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1894 TLRQRRQVE 1902>NP_958785 Length = 4551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1920 TLRQRRQVE 1928>NP_958783 Length = 4515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1884 TLRQRRQVE 1892>NP_958786 Length = 4547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1916 TLRQRRQVE 1924>NP_002435 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 558 TLRQIRQ 564>NP_003370 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 567 TLRQIRQ 573>NP_001104547 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 567 TLRQIRQ 573>NP_001319 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 TV+Q+RQ Sbjct: 251 TVKQMRQ 257>NP_001012632 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 TV+Q+RQ Sbjct: 240 TVKQMRQ 246>NP_001247421 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 564 TLRQIRQ 570>NP_001247423 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 428 TLRQIRQ 434>NP_958782 Length = 4684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 2053 TLRQRRQVE 2061>NP_001247422 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 564 TLRQIRQ 570>NP_001171588 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+R+++ Sbjct: 95 TVKQIRKLR 103>NP_958784 Length = 4547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1916 TLRQRRQVE 1924>NP_002897 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 564 TLRQIRQ 570>NP_001247425 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 160 TLRQIRQ 166>NP_004888 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+R+++ Sbjct: 95 TVKQIRKLR 103>NP_149989 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VRQLRQ 7 VRQLRQ Sbjct: 122 VRQLRQ 127>NP_001247424 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 217 TLRQIRQ 223>NP_001272320 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TVRQLR 6 TVRQLR Sbjct: 4 TVRQLR 9>NP_076991 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRQLRQI 8 VRQLR++ Sbjct: 389 VRQLREV 395>XP_005262326 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 T+RQ+RQ Sbjct: 559 TLRQIRQ 565>XP_005256858 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRQLRQI 8 VRQLR++ Sbjct: 171 VRQLREV 177>XP_005256244 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 80 LRQLQQLK 87>XP_006721357 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 80 LRQLQQLK 87>XP_006721356 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 80 LRQLQQLK 87>XP_006718141 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TVRQLRQIK 9 TV+Q+R+++ Sbjct: 95 TVKQIRKLR 103>XP_005251041 Length = 4520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1889 TLRQRRQVE 1897>XP_005251040 Length = 4524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1893 TLRQRRQVE 1901>XP_006716653 Length = 4529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1898 TLRQRRQVE 1906>XP_006716652 Length = 4529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1898 TLRQRRQVE 1906>XP_005251039 Length = 4530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1899 TLRQRRQVE 1907>XP_005251038 Length = 4538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1907 TLRQRRQVE 1915>XP_005251036 Length = 4552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1921 TLRQRRQVE 1929>XP_005251037 Length = 4552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1921 TLRQRRQVE 1929>XP_005251035 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1925 TLRQRRQVE 1933>XP_006716651 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 1948 TLRQRRQVE 1956>XP_005251034 Length = 4685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 2054 TLRQRRQVE 2062>XP_005251033 Length = 4689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVRQLRQIK 9 T+RQ RQ++ Sbjct: 2058 TLRQRRQVE 2066>XP_005272320 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 TV+Q+RQ Sbjct: 240 TVKQMRQ 246>XP_005272319 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 TV+Q+RQ Sbjct: 240 TVKQMRQ 246>XP_005272318 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVRQLRQ 7 TV+Q+RQ Sbjct: 251 TVKQMRQ 257>NP_112583 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQLRQIK 9 +RQL+Q+K Sbjct: 80 LRQLQQLK 87Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.138 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 372,427 Number of extensions: 630 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |