Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 18 1482 NP_004439 18 1482 NP_001276865 18 1482 NP_001005862 18 1482 XP_005257197 18 1482 XP_006721828 18 1482 NP_005219 18 1935 NP_001036064 18 1935 NP_005226 18 1935 XP_005246434 18 1935 XP_005246433 18 1935 XP_005246432 18 1935 XP_006712427 18 1935 NP_004733 16 5631 NP_001028229 16 5631 NP_056335 16 5631 XP_005265631 16 5631 XP_006713477 16 5631 XP_006713476 16 5631 XP_005265628 16 5631 XP_005265627 16 5631 XP_006713475 16 5631 XP_006713474 16 5631 XP_005265625 16 5631 XP_006713473 16 5631 XP_005265623 16 5631 XP_005265622 16 5631 XP_005265621 16 5631 XP_005265620 16 5631 XP_006713472 16 5631 XP_006713471 16 5631 XP_006713470 16 5631 NP_057336 15 9605 XP_006712120 15 9605 XP_005264512 15 9605 XP_005264511 15 9605 XP_006712119 15 9605 XP_005264510 15 9605 XP_006712118 15 9605 XP_005264509 15 9605 XP_005264508 15 9605 XP_006712117 15 9605 XP_005264507 15 9605 XP_005264506 15 9605>NP_001276866 Length = 1055 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQLV QLM Sbjct: 793 TVQLVTQLM 801>NP_004439 Length = 1255 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQLV QLM Sbjct: 793 TVQLVTQLM 801>NP_001276865 Length = 1240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQLV QLM Sbjct: 778 TVQLVTQLM 786>NP_001005862 Length = 1225 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQLV QLM Sbjct: 763 TVQLVTQLM 771>XP_005257197 Length = 1225 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQLV QLM Sbjct: 763 TVQLVTQLM 771>XP_006721828 Length = 1336 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQLV QLM Sbjct: 874 TVQLVTQLM 882>NP_005219 Length = 1210 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 TVQL+ QLM Sbjct: 785 TVQLITQLM 793>NP_001036064 Length = 1292 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 T+QLV QLM Sbjct: 791 TIQLVTQLM 799>NP_005226 Length = 1308 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 T+QLV QLM Sbjct: 791 TIQLVTQLM 799>XP_005246434 Length = 1282 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 T+QLV QLM Sbjct: 781 TIQLVTQLM 789>XP_005246433 Length = 1298 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 T+QLV QLM Sbjct: 781 TIQLVTQLM 789>XP_005246432 Length = 1307 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 T+QLV QLM Sbjct: 806 TIQLVTQLM 814>XP_006712427 Length = 1323 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVQLVIQLM 9 T+QLV QLM Sbjct: 806 TIQLVTQLM 814>NP_004733 Length = 1256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 902 QLVVQLM 908>NP_001028229 Length = 1462 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 874 QLVVQLM 880>NP_056335 Length = 1287 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 902 QLVVQLM 908>XP_005265631 Length = 1288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 902 QLVVQLM 908>XP_006713477 Length = 1290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 904 QLVVQLM 910>XP_006713476 Length = 1375 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 786 QLVVQLM 792>XP_005265628 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 874 QLVVQLM 880>XP_005265627 Length = 1425 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 904 QLVVQLM 910>XP_006713475 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 874 QLVVQLM 880>XP_006713474 Length = 1465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 876 QLVVQLM 882>XP_005265625 Length = 1478 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 890 QLVVQLM 896>XP_006713473 Length = 1479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 890 QLVVQLM 896>XP_005265623 Length = 1479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 902 QLVVQLM 908>XP_005265622 Length = 1481 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 904 QLVVQLM 910>XP_005265621 Length = 1491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 902 QLVVQLM 908>XP_005265620 Length = 1492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 904 QLVVQLM 910>XP_006713472 Length = 1492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 903 QLVVQLM 909>XP_006713471 Length = 1492 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 903 QLVVQLM 909>XP_006713470 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QLVIQLM 9 QLV+QLM Sbjct: 904 QLVVQLM 910>NP_057336 Length = 4857 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2626 TSQLIIQL 2633>XP_006712120 Length = 4812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2581 TSQLIIQL 2588>XP_005264512 Length = 4840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2609 TSQLIIQL 2616>XP_005264511 Length = 4847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2653 TSQLIIQL 2660>XP_006712119 Length = 4851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2620 TSQLIIQL 2627>XP_005264510 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2630 TSQLIIQL 2637>XP_006712118 Length = 4864 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2653 TSQLIIQL 2660>XP_005264509 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2639 TSQLIIQL 2646>XP_005264508 Length = 4875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2644 TSQLIIQL 2651>XP_006712117 Length = 4878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2647 TSQLIIQL 2654>XP_005264507 Length = 4880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2649 TSQLIIQL 2656>XP_005264506 Length = 4884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVQLVIQL 8 T QL+IQL Sbjct: 2653 TSQLIIQL 2660Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.145 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 264,188 Number of extensions: 402 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |