Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002941 16 5631 NP_055177 16 7355 NP_932164 16 7355 NP_001137469 16 7355 NP_001137468 16 7355 NP_060715 16 7355 NP_006332 16 7355 XP_005263480 16 7355 NP_001120797 16 7355 NP_001001915 16 7355 NP_001018098 15 9605 NP_060154 15 9605 NP_001265247 15 9605 NP_060550 15 9605 NP_006854 15 9605 NP_065872 15 9605 NP_937817 15 9605 NP_705618 15 9605 NP_055640 15 9605 NP_004289 15 9605 NP_001265248 15 9605 NP_001158508 15 9605 NP_002532 15 9605 NP_001265241 15 9605 XP_006726237 15 9605 XP_006726236 15 9605 XP_006726235 15 9605 XP_006726234 15 9605 XP_006726360 15 9605 XP_006726359 15 9605 XP_006726358 15 9605 XP_006726357 15 9605 XP_006726324 15 9605 XP_006726323 15 9605 XP_006726322 15 9605 XP_006726321 15 9605 XP_006723045 15 9605 XP_006723044 15 9605 XP_006723043 15 9605 XP_006723042 15 9605 XP_005249816 15 9605 XP_005249818 15 9605>NP_002941 Length = 607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TVLIHVRL 8 TV+I+VRL Sbjct: 452 TVIIYVRL 459>NP_055177 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 T+L H+R+S Sbjct: 21 TILHHLRMS 29>NP_932164 Length = 338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 T+L H+R+S Sbjct: 21 TILHHLRMS 29>NP_001137469 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IHVRLS Sbjct: 447 IHVRLS 452>NP_001137468 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IHVRLS Sbjct: 599 IHVRLS 604>NP_060715 Length = 1010 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IHVRLS Sbjct: 656 IHVRLS 661>NP_006332 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TVLIHVR 7 TVL+H R Sbjct: 147 TVLVHTR 153>XP_005263480 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TVLIHVR 7 TVL+H R Sbjct: 212 TVLVHTR 218>NP_001120797 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TVLIHVR 7 TVL+H R Sbjct: 147 TVLVHTR 153>NP_001001915 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TVLIHVRL 8 TVL+H+ L Sbjct: 136 TVLMHIHL 143>NP_001018098 Length = 3628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIHVRLS 9 L+HVR+S Sbjct: 812 LMHVRIS 818>NP_060154 Length = 3710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIHVRLS 9 L+HVR+S Sbjct: 769 LMHVRIS 775>NP_001265247 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 6 TVLICLRLS 14>NP_060550 Length = 3585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIHVRLS 9 L+HVR+S Sbjct: 769 LMHVRIS 775>NP_006854 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 6 TVLICLRLS 14>NP_065872 Length = 3753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIHVRLS 9 L+HVR+S Sbjct: 812 LMHVRIS 818>NP_937817 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLIHVRLS 9 T L+H RLS Sbjct: 567 TSLLHPRLS 575>NP_705618 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIHVRL 8 L+HVRL Sbjct: 387 LVHVRL 392>NP_055640 Length = 2271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TVLIHVRL 8 T+L HVR+ Sbjct: 2234 TLLTHVRM 2241>NP_004289 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIHVRL 8 L+HVRL Sbjct: 328 LVHVRL 333>NP_001265248 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 6 TVLICLRLS 14>NP_001158508 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IH+RLS Sbjct: 665 IHIRLS 670>NP_002532 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IH+RLS Sbjct: 669 IHIRLS 674>NP_001265241 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIHVRL 8 L+HVRL Sbjct: 387 LVHVRL 392>XP_006726237 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726236 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726235 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726234 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726360 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726359 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726358 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726357 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726324 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726323 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726322 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006726321 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006723045 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006723044 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006723043 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_006723042 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TVLIHVRLS 9 TVLI +RLS Sbjct: 23 TVLICLRLS 31>XP_005249816 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IH+RLS Sbjct: 684 IHIRLS 689>XP_005249818 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IHVRLS 9 IH+RLS Sbjct: 680 IHIRLS 685Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.144 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,198 Number of extensions: 466 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |