Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1482 XP_006718908 18 1482 XP_005271621 18 1482 XP_006718907 18 1482 XP_006718906 18 1482 XP_005271619 18 1482 XP_005271618 18 1482 NP_060519 17 4312 XP_006722847 17 4312 NP_001164496 16 7355 NP_569075 16 7355 NP_569076 16 7355 NP_002830 16 7355 NP_001035802 16 7355 NP_569077 16 7355 NP_001017361 16 7355 NP_006717 16 7355 NP_073609 16 7355 NP_001186211 16 7355 XP_006718339 16 7355 XP_006718338 16 7355 XP_006718337 16 7355 XP_006718336 16 7355 XP_006716902 16 7355 XP_006716901 16 7355 XP_006716900 16 7355 XP_006716899 16 7355 XP_006716898 16 7355 XP_006716897 16 7355 XP_006716896 16 7355 XP_006716895 16 7355 XP_006716894 16 7355 XP_006716893 16 7355 XP_006716892 16 7355 XP_006716891 16 7355 XP_006716890 16 7355 XP_006716889 16 7355 XP_006716888 16 7355 XP_006716887 16 7355 XP_006716886 16 7355 XP_006716885 16 7355 XP_006716884 16 7355 XP_006716883 16 7355 XP_006716882 16 7355 XP_006716881 16 7355 XP_006716880 16 7355 XP_006716879 16 7355 XP_006716878 16 7355 XP_006716877 16 7355 XP_006716876 16 7355 XP_006715414 16 7355 XP_005263433 16 7355 XP_005263432 16 7355 XP_005263431 16 7355 XP_006714492 16 7355 XP_005263430 16 7355 XP_005263429 16 7355 NP_689914 15 9605 NP_004787 15 9605 XP_006720386 15 9605 XP_006720385 15 9605 XP_005268275 15 9605>NP_000042 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 1645 VKLVVNLL 1652>XP_006718908 Length = 1708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 297 VKLVVNLL 304>XP_005271621 Length = 2708 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 1297 VKLVVNLL 1304>XP_006718907 Length = 3050 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 1639 VKLVVNLL 1646>XP_006718906 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 1645 VKLVVNLL 1652>XP_005271619 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 1645 VKLVVNLL 1652>XP_005271618 Length = 3056 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VKLVVNLL 9 VKLVVNLL Sbjct: 1645 VKLVVNLL 1652>NP_060519 Length = 149 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 VKLVVN L Sbjct: 38 VKLVVNFL 45>XP_006722847 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 VKLVVN L Sbjct: 38 VKLVVNFL 45>NP_001164496 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 647 TQKLIVNL 654>NP_569075 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 657 TQKLIVNL 664>NP_569076 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 657 TQKLIVNL 664>NP_002830 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1068 TQKLIVNL 1075>NP_001035802 Length = 1502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 654 TQKLIVNL 661>NP_569077 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 652 TQKLIVNL 659>NP_001017361 Length = 217 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TVKLVVNL 8 T+K+++NL Sbjct: 99 TIKMIMNL 106>NP_006717 Length = 2863 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2172 TVKKVVNYL 2180>NP_073609 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 +KL +NLL Sbjct: 321 IKLAINLL 328>NP_001186211 Length = 2851 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2161 TVKKVVNYL 2169>XP_006718339 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 +KL +NLL Sbjct: 321 IKLAINLL 328>XP_006718338 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 +KL +NLL Sbjct: 321 IKLAINLL 328>XP_006718337 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 +KL +NLL Sbjct: 321 IKLAINLL 328>XP_006718336 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKLVVNLL 9 +KL +NLL Sbjct: 321 IKLAINLL 328>XP_006716902 Length = 1491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 644 TQKLIVNL 651>XP_006716901 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 648 TQKLIVNL 655>XP_006716900 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 652 TQKLIVNL 659>XP_006716899 Length = 1501 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 657 TQKLIVNL 664>XP_006716898 Length = 1502 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 654 TQKLIVNL 661>XP_006716897 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 644 TQKLIVNL 651>XP_006716896 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 657 TQKLIVNL 664>XP_006716895 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 647 TQKLIVNL 654>XP_006716894 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 657 TQKLIVNL 664>XP_006716893 Length = 1520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 657 TQKLIVNL 664>XP_006716892 Length = 1521 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 658 TQKLIVNL 665>XP_006716891 Length = 1882 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1019 TQKLIVNL 1026>XP_006716890 Length = 1893 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1046 TQKLIVNL 1053>XP_006716889 Length = 1899 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1055 TQKLIVNL 1062>XP_006716888 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006716887 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1068 TQKLIVNL 1075>XP_006716886 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006716885 Length = 1918 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006716884 Length = 1922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1059 TQKLIVNL 1066>XP_006716883 Length = 1923 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1060 TQKLIVNL 1067>XP_006716882 Length = 1927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006716881 Length = 1928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1065 TQKLIVNL 1072>XP_006716880 Length = 1929 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1068 TQKLIVNL 1075>XP_006716879 Length = 1931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006716878 Length = 1931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1068 TQKLIVNL 1075>XP_006716877 Length = 1931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006716876 Length = 1932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVKLVVNL 8 T KL+VNL Sbjct: 1069 TQKLIVNL 1076>XP_006715414 Length = 128 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TVKLVVNL 8 T+K+++NL Sbjct: 99 TIKMIMNL 106>XP_005263433 Length = 2832 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2136 TVKKVVNYL 2144>XP_005263432 Length = 2852 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2161 TVKKVVNYL 2169>XP_005263431 Length = 2857 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2161 TVKKVVNYL 2169>XP_006714492 Length = 2867 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2172 TVKKVVNYL 2180>XP_005263430 Length = 2868 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2172 TVKKVVNYL 2180>XP_005263429 Length = 2868 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 TVK VVN L Sbjct: 2172 TVKKVVNYL 2180>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TVKLVVNLL 9 T LVVNLL Sbjct: 1701 TGNLVVNLL 1709>NP_004787 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLVVNL 8 VKL+VNL Sbjct: 370 VKLMVNL 376>XP_006720386 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLVVNL 8 VKL+VNL Sbjct: 743 VKLMVNL 749>XP_006720385 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLVVNL 8 VKL+VNL Sbjct: 751 VKLMVNL 757>XP_005268275 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VKLVVNL 8 VKL+VNL Sbjct: 755 VKLMVNL 761Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.145 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 303,005 Number of extensions: 481 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |