Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 18 1135 XP_005250103 18 1135 XP_005250102 18 1135 NP_054742 17 3301 NP_060341 17 3301 NP_001243391 17 3301 NP_001243389 17 3301 NP_001243392 17 3301 NP_001243385 17 3301 XP_005244820 17 3301 XP_006710778 17 3301 NP_057132 16 5631 NP_008880 16 7355 NP_001258963 16 7355 NP_001120868 16 7355 NP_000050 16 7355 NP_001013433 16 7355 NP_060785 16 7355 NP_361014 16 7355 NP_115551 16 7355 NP_001271359 16 7355 NP_001271360 16 7355 XP_005259076 16 7355 XP_006722914 16 7355 NP_060178 16 7355 NP_008986 15 9605 NP_940980 15 9605 NP_001155178 15 9605 NP_000135 15 9605 NP_852090 15 9605 NP_002401 15 9605 NP_055599 15 9605 NP_937879 15 9605 XP_005268686 15 9605 XP_006717660 15 9605 XP_005263727 15 9605 XP_005263726 15 9605 XP_006712598 15 9605 XP_005263725 15 9605 XP_006712597 15 9605 XP_005263723 15 9605 XP_005245690 15 9605 XP_006711728 15 9605 XP_006711727 15 9605 XP_006711726 15 9605 XP_005245686 15 9605 XP_006711725 15 9605 XP_006711724 15 9605 XP_006711723 15 9605 XP_006711722 15 9605 NP_000929 15 9605>NP_004324 Length = 766 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVGQRI SG Sbjct: 458 TVGQRIGSG 466>XP_005250103 Length = 758 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVGQRI SG Sbjct: 458 TVGQRIGSG 466>XP_005250102 Length = 767 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVGQRI SG Sbjct: 458 TVGQRIGSG 466>NP_054742 Length = 494 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVGQRIVSG 9 TVG +VSG Sbjct: 376 TVGDNVVSG 384>NP_060341 Length = 600 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 358 TVGHKILSG 366>NP_001243391 Length = 502 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 260 TVGHKILSG 268>NP_001243389 Length = 571 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 329 TVGHKILSG 337>NP_001243392 Length = 499 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 257 TVGHKILSG 265>NP_001243385 Length = 606 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 364 TVGHKILSG 372>XP_005244820 Length = 502 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 260 TVGHKILSG 268>XP_006710778 Length = 484 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG +I+SG Sbjct: 358 TVGHKILSG 366>NP_057132 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 +VGQR++ G Sbjct: 138 SVGQRLLQG 146>NP_008880 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGQRIVSG 9 VG++I+SG Sbjct: 10 VGEKILSG 17>NP_001258963 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGQRIVSG 9 VG++I+SG Sbjct: 10 VGEKILSG 17>NP_001120868 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGQRIVSG 9 VG++I+SG Sbjct: 10 VGEKILSG 17>NP_000050 Length = 3418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVGQRIV 7 TVGQ+I+ Sbjct: 2746 TVGQKII 2752>NP_001013433 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GQRIVSG 9 G RIVSG Sbjct: 273 GNRIVSG 279Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 G+R+VSG Sbjct: 393 GRRVVSG 399>NP_060785 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GQRIVSG 9 G RIVSG Sbjct: 311 GNRIVSG 317Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 G+R+VSG Sbjct: 431 GRRVVSG 437>NP_361014 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GQRIVSG 9 G RIVSG Sbjct: 391 GNRIVSG 397Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 G+R+VSG Sbjct: 511 GRRVVSG 517>NP_115551 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 GQR++SG Sbjct: 260 GQRLLSG 266>NP_001271359 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 GQR++SG Sbjct: 241 GQRLLSG 247>NP_001271360 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 GQR++SG Sbjct: 70 GQRLLSG 76>XP_005259076 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 G+R++SG Sbjct: 244 GERVISG 250>XP_006722914 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGQRIVSG 9 VG++I+SG Sbjct: 10 VGEKILSG 17>NP_060178 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 GQRIVSG 9 G+R++SG Sbjct: 244 GERVISG 250>NP_008986 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQRIVSG 9 VGQ+ +SG Sbjct: 799 VGQQAISG 806>NP_940980 Length = 2527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TVGQRIVSG 9 T G RIV G Sbjct: 2068 TTGGRIVEG 2076>NP_001155178 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 T+G+R V+G Sbjct: 3 TLGRRAVAG 11>NP_000135 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 T+G+R V+G Sbjct: 3 TLGRRAVAG 11>NP_852090 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 T+G+R V+G Sbjct: 3 TLGRRAVAG 11>NP_002401 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>NP_055599 Length = 1522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 719 TVGKDVVAG 727>NP_937879 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 759 TVGKDVVAG 767>XP_005268686 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TVGQRIVSG 9 T G RIV G Sbjct: 2068 TTGGRIVEG 2076>XP_006717660 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQRIVSG 9 VGQ+ +SG Sbjct: 778 VGQQAISG 785>XP_005263727 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005263726 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>XP_006712598 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005263725 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>XP_006712597 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005263723 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TVGQRIV 7 TVG RIV Sbjct: 340 TVGDRIV 346>XP_005245690 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 338 TVGKDVVAG 346>XP_006711728 Length = 1538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 735 TVGKDVVAG 743>XP_006711727 Length = 1547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 776 TVGKDVVAG 784>XP_006711726 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 756 TVGKDVVAG 764>XP_005245686 Length = 1563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 760 TVGKDVVAG 768>XP_006711725 Length = 1568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 765 TVGKDVVAG 773>XP_006711724 Length = 1569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 766 TVGKDVVAG 774>XP_006711723 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 775 TVGKDVVAG 783>XP_006711722 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVGQRIVSG 9 TVG+ +V+G Sbjct: 776 TVGKDVVAG 784>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VGQRIVS 8 +GQRIV+ Sbjct: 252 IGQRIVA 258Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,939 Number of extensions: 912 Number of successful extensions: 54 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |