Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 509 NP_001005476 18 1935 NP_003619 18 1935 NP_001138424 16 5631 NP_001257903 16 7355 NP_001257628 16 7355 NP_001257625 16 7355 NP_001257626 16 7355 NP_001257627 16 7355 NP_001257624 16 7355 NP_060757 16 7355 NP_056272 16 7355 XP_005260155 16 7355 XP_006721269 16 7355 XP_005252701 16 7355 XP_006717604 16 7355 XP_006717603 16 7355 NP_115809 16 7355 NP_001104026 15 9605 NP_001122302 15 9605 NP_001122303 15 9605 NP_001158302 15 9605 NP_001122301 15 9605 NP_001729 15 9605 NP_001447 15 9605 NP_005338 15 9605 NP_001157790 15 9605 NP_001888 15 9605 NP_001157791 15 9605 NP_001157789 15 9605 NP_001448 15 9605 NP_001123633 15 9605 NP_001129737 15 9605 NP_612490 15 9605 XP_005261428 15 9605 XP_005261427 15 9605 XP_006717757 15 9605 XP_006717756 15 9605 XP_006713130 15 9605 XP_005265039 15 9605 XP_005265038 15 9605 XP_005265035 15 9605 XP_005265034 15 9605 NP_689922 15 9605>NP_002430 Length = 1137 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVDIKGSQ 8 TVDIKGSQ Sbjct: 480 TVDIKGSQ 487>NP_001005476 Length = 1149 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TVDIKGSQT 9 TV+++GSQT Sbjct: 432 TVELQGSQT 440>NP_003619 Length = 1192 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TVDIKGSQT 9 TV+++GSQT Sbjct: 432 TVELQGSQT 440>NP_001138424 Length = 2172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 1775 TVDVKGN 1781>NP_001257903 Length = 5121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 TV+IKG T Sbjct: 4403 TVEIKGKGT 4411>NP_001257628 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 469 TVDLKGA 475>NP_001257625 Length = 816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 491 TVDLKGA 497>NP_001257626 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 474 TVDLKGA 480>NP_001257627 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 444 TVDLKGA 450>NP_001257624 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 516 TVDLKGA 522>NP_060757 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 521 TVDLKGA 527>NP_056272 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVDIKGSQ 8 TV+IKG Q Sbjct: 93 TVEIKGIQ 100>XP_005260155 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TVDIKGSQ 8 ++D+KG Q Sbjct: 186 SIDVKGEQ 193>XP_006721269 Length = 5138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 TV+IKG T Sbjct: 4420 TVEIKGKGT 4428>XP_005252701 Length = 794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 469 TVDLKGA 475>XP_006717604 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 521 TVDLKGA 527>XP_006717603 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TVDIKGS 7 TVD+KG+ Sbjct: 521 TVDLKGA 527>NP_115809 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TVDIKGSQ 8 ++D+KG Q Sbjct: 295 SIDVKGEQ 302>NP_001104026 Length = 2647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1089 TIDTKGAGT 1097>NP_001122302 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDIKGSQT 9 VDIK S+T Sbjct: 32 VDIKTSET 39>NP_001122303 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDIKGSQT 9 VDIK S+T Sbjct: 32 VDIKTSET 39>NP_001158302 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDIKGSQT 9 VDIK S+T Sbjct: 32 VDIKTSET 39>NP_001122301 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDIKGSQT 9 VDIK S+T Sbjct: 32 VDIKTSET 39>NP_001729 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VDIKGSQT 9 VDIK S+T Sbjct: 32 VDIKTSET 39>NP_001447 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1089 TIDTKGAGT 1097>NP_005338 Length = 654 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VDIKGSQT 9 VDI G QT Sbjct: 130 VDIGGGQT 137>NP_001157790 Length = 2591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>NP_001888 Length = 2322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VDIKGSQT 9 + +KGSQT Sbjct: 1582 LSLKGSQT 1589>NP_001157791 Length = 2578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>NP_001157789 Length = 2633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>NP_001448 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>NP_001123633 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T D+K SQT Sbjct: 516 TSDLKPSQT 524>NP_001129737 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TVDIKGSQ 8 T+D++G Q Sbjct: 402 TIDLQGEQ 409>NP_612490 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TVDIKGSQ 8 T+D++G+Q Sbjct: 282 TLDLRGNQ 289>XP_005261428 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TVDIKGSQ 8 T+D++G+Q Sbjct: 282 TLDLRGNQ 289>XP_005261427 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TVDIKGSQ 8 T+D++G+Q Sbjct: 282 TLDLRGNQ 289>XP_006717757 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T D+K SQT Sbjct: 406 TSDLKPSQT 414>XP_006717756 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T D+K SQT Sbjct: 406 TSDLKPSQT 414>XP_006713130 Length = 2109 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>XP_005265039 Length = 2177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>XP_005265038 Length = 2181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>XP_005265035 Length = 2609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>XP_005265034 Length = 2622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T+D KG+ T Sbjct: 1062 TIDTKGAGT 1070>NP_689922 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVDIKGSQT 9 T D+K SQT Sbjct: 516 TSDLKPSQT 524Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.120 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,516 Number of extensions: 1039 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |