Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 21 175 NP_001277143 21 175 NP_001319 21 175 NP_001012632 21 175 NP_001077383 21 175 NP_001320 21 175 NP_073713 21 175 XP_005269629 21 175 XP_005269628 21 175 XP_005269627 21 175 XP_005269626 21 175 XP_006717706 21 175 XP_005269625 21 175 XP_005269624 21 175 XP_006717705 21 175 XP_005269622 21 175 XP_005269621 21 175 XP_006717704 21 175 XP_005269619 21 175 XP_005269618 21 175 XP_005272320 21 175 XP_005272319 21 175 XP_005272318 21 175 XP_005276368 18 1482 XP_005250138 18 1482 XP_005276070 18 1482 NP_001186017 17 3301 NP_001186015 17 3301 NP_001186016 17 3301 NP_150278 17 3301 NP_001002006 17 3301 NP_001186032 17 3301 NP_055680 17 3301 NP_001186033 17 3301 NP_004324 17 4312 NP_689799 17 4312 XP_005269639 17 4312 XP_006717716 17 4312 XP_006717715 17 4312 XP_006717714 17 4312 XP_006717713 17 4312 XP_006717712 17 4312 XP_006717711 17 4312 XP_005269635 17 4312 XP_006717710 17 4312 XP_006717709 17 4312 XP_006717708 17 4312 XP_005250103 17 4312 XP_005250102 17 4312 NP_005888 16 5631 NP_001138821 16 5631 XP_006710686 16 5631 XP_005270897 16 5631 XP_005270896 16 5631 XP_006710685 16 5631 NP_001003750 16 5631 NP_001009905 16 7355 XP_006725352 16 7355 XP_006722336 16 7355 XP_006722335 16 7355 NP_001025056 15 9605 NP_079182 15 9605 NP_001032671 15 9605 NP_219499 15 9605 XP_005250691 15 9605 XP_005244859 15 9605 XP_005244858 15 9605>NP_001277144 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>NP_001277143 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>NP_001319 Length = 440 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 50 TVAFCDAQ 57>NP_001012632 Length = 429 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 39 TVAFCDAQ 46>NP_001077383 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>NP_001320 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>NP_073713 Length = 985 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 596 TVAFCDAQ 603>XP_005269629 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269628 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269627 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269626 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_006717706 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269625 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269624 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_006717705 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269622 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269621 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_006717704 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269619 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005269618 Length = 445 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 56 TVAFCDAQ 63>XP_005272320 Length = 430 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 39 TVAFCDAQ 46>XP_005272319 Length = 430 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 39 TVAFCDAQ 46>XP_005272318 Length = 441 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVAFCDAQ 8 TVAFCDAQ Sbjct: 50 TVAFCDAQ 57>XP_005276368 Length = 103 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AFCDAQL 9 A+CDAQL Sbjct: 46 AYCDAQL 52>XP_005250138 Length = 103 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AFCDAQL 9 A+CDAQL Sbjct: 46 AYCDAQL 52>XP_005276070 Length = 103 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AFCDAQL 9 A+CDAQL Sbjct: 46 AYCDAQL 52>NP_001186017 Length = 612 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 457 MAYCDTQL 464>NP_001186015 Length = 593 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 438 MAYCDTQL 445>NP_001186016 Length = 627 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 472 MAYCDTQL 479>NP_150278 Length = 550 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 395 MAYCDTQL 402>NP_001002006 Length = 610 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 455 MAYCDTQL 462>NP_001186032 Length = 650 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 397 MAYCDTQL 404>NP_055680 Length = 1401 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TVAFCDAQL 9 + FCD+QL Sbjct: 1048 SATFCDSQL 1056>NP_001186033 Length = 602 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VAFCDAQL 9 +A+CD QL Sbjct: 455 MAYCDTQL 462>NP_004324 Length = 766 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TVAFCD 6 T+AFCD Sbjct: 244 TLAFCD 249>NP_689799 Length = 1684 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1269 FCDSQL 1274>XP_005269639 Length = 1580 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1212 FCDSQL 1217>XP_006717716 Length = 1619 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1251 FCDSQL 1256>XP_006717715 Length = 1660 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1245 FCDSQL 1250>XP_006717714 Length = 1665 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1302 FCDSQL 1307>XP_006717713 Length = 1666 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1251 FCDSQL 1256>XP_006717712 Length = 1670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1302 FCDSQL 1307>XP_006717711 Length = 1677 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1262 FCDSQL 1267>XP_005269635 Length = 1695 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1280 FCDSQL 1285>XP_006717710 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1291 FCDSQL 1296>XP_006717709 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1302 FCDSQL 1307>XP_006717708 Length = 1717 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FCDAQL 9 FCD+QL Sbjct: 1302 FCDSQL 1307>XP_005250103 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TVAFCD 6 T+AFCD Sbjct: 244 TLAFCD 249>XP_005250102 Length = 767 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TVAFCD 6 T+AFCD Sbjct: 244 TLAFCD 249>NP_005888 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FCDAQL 9 FCD QL Sbjct: 36 FCDVQL 41>NP_001138821 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FCDAQL 9 FCD QL Sbjct: 36 FCDVQL 41>XP_006710686 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FCDAQL 9 FCD QL Sbjct: 36 FCDVQL 41>XP_005270897 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FCDAQL 9 FCD QL Sbjct: 36 FCDVQL 41>XP_005270896 Length = 465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FCDAQL 9 FCD QL Sbjct: 36 FCDVQL 41>XP_006710685 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 FCDAQL 9 FCD QL Sbjct: 36 FCDVQL 41>NP_001003750 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TVAFCDAQL 9 ++AFCD+ + Sbjct: 165 SLAFCDSSI 173>NP_001009905 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VAFCD 6 VAFCD Sbjct: 289 VAFCD 293>XP_006725352 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VAFCD 6 VAFCD Sbjct: 274 VAFCD 278>XP_006722336 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VAFCD 6 VAFCD Sbjct: 274 VAFCD 278>XP_006722335 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VAFCD 6 VAFCD Sbjct: 289 VAFCD 293>NP_001025056 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TVAFC 5 TVAFC Sbjct: 159 TVAFC 163>NP_079182 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VAFCDAQ 8 + FCDA+ Sbjct: 11 IPFCDAK 17>NP_001032671 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 VAFCDAQ 8 + FCDA+ Sbjct: 11 IPFCDAK 17>NP_219499 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 TVAFCDA 7 T+AFC + Sbjct: 661 TIAFCSS 667>XP_005250691 Length = 1645 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 TVAFCDA 7 T+AFC + Sbjct: 643 TIAFCSS 649>XP_005244859 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TVAFC 5 TVAFC Sbjct: 96 TVAFC 100>XP_005244858 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TVAFC 5 TVAFC Sbjct: 159 TVAFC 163Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.135 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,261 Number of extensions: 385 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |