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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001257436                                                           20     509
NP_001257437                                                           20     509
NP_006281                                                              20     509
XP_006715618                                                           20     509
XP_005267176                                                           20     509
NP_001273171                                                           17    2528
NP_001511                                                              17    2528
XP_006721105                                                           17    2528
NP_005758                                                              17    3301
NP_001155969                                                           17    3301
NP_001155970                                                           17    3301
NP_001184113                                                           16    5631
NP_478129                                                              16    7355
XP_005270164                                                           16    7355
XP_006712514                                                           15    9605

>NP_001257436
          Length = 790

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TTYLINAAK 9
           TT+LINAAK
Sbjct: 321 TTHLINAAK 329



>NP_001257437
          Length = 790

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TTYLINAAK 9
           TT+LINAAK
Sbjct: 321 TTHLINAAK 329



>NP_006281
          Length = 790

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TTYLINAAK 9
           TT+LINAAK
Sbjct: 321 TTHLINAAK 329



>XP_006715618
          Length = 577

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TTYLINAAK 9
           TT+LINAAK
Sbjct: 108 TTHLINAAK 116



>XP_005267176
          Length = 790

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TTYLINAAK 9
           TT+LINAAK
Sbjct: 321 TTHLINAAK 329



>NP_001273171
          Length = 2084

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    TTYLINAAK 9
            T+Y+IN AK
Sbjct: 1134 TSYIINQAK 1142



>NP_001511
          Length = 2109

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    TTYLINAAK 9
            T+Y+IN AK
Sbjct: 1134 TSYIINQAK 1142



>XP_006721105
          Length = 2046

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1    TTYLINAAK 9
            T+Y+IN AK
Sbjct: 1134 TSYIINQAK 1142



>NP_005758
          Length = 344

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TTYLINAA 8
          TTY+IN A
Sbjct: 53 TTYMINLA 60



>NP_001155969
          Length = 344

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TTYLINAA 8
          TTY+IN A
Sbjct: 53 TTYMINLA 60



>NP_001155970
          Length = 344

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TTYLINAA 8
          TTY+IN A
Sbjct: 53 TTYMINLA 60



>NP_001184113
          Length = 333

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TTYLINAA 8
          T YLINA+
Sbjct: 7  TDYLINAS 14



>NP_478129
          Length = 329

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   TTYLINAA 8
           +TYL+N A
Sbjct: 125 STYLVNQA 132



>XP_005270164
          Length = 329

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   TTYLINAA 8
           +TYL+N A
Sbjct: 125 STYLVNQA 132



>XP_006712514
          Length = 2496

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    TTYLINAA 8
            T YL+N+A
Sbjct: 2485 TRYLLNSA 2492



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.314    0.121    0.314 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 365,790
Number of extensions: 350
Number of successful extensions: 15
Number of sequences better than 10000.0: 15
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 15
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)