Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_001037835 18 1935 NP_612504 17 2528 NP_065776 17 2528 XP_005250278 17 2528 XP_006715966 17 2528 XP_005250277 17 2528 XP_006715965 17 2528 XP_005250276 17 2528 XP_006715964 17 2528 XP_006715963 17 2528 NP_001185744 17 4312 XP_005275558 17 4312 XP_005275391 17 4312 XP_005275259 17 4312 XP_005274965 17 4312 XP_005272815 17 4312 XP_005274885 17 4312 XP_005248836 17 4312 NP_689982 16 7355 NP_620145 16 7355 NP_775871 16 7355 XP_006722779 16 7355 XP_006722778 16 7355 XP_005259585 16 7355 XP_006722777 16 7355 XP_006720088 16 7355 XP_006720087 16 7355 NP_115495 15 9605 NP_073577 15 9605 NP_001106710 15 9605 NP_001273700 15 9605 NP_115593 15 9605 NP_942592 15 9605 NP_001157934 15 9605 XP_006715999 15 9605 XP_006715998 15 9605 XP_006715997 15 9605 XP_005265728 15 9605 XP_005265724 15 9605>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TTTTYISAS 9 TT+TYISAS Sbjct: 415 TTSTYISAS 423>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TTTTYISAS 9 TT+TYISAS Sbjct: 415 TTSTYISAS 423>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TTTTYISAS 9 TT+TYISAS Sbjct: 415 TTSTYISAS 423>NP_001037835 Length = 326 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TTTYISAS 9 TTTY++AS Sbjct: 296 TTTYVNAS 303>NP_612504 Length = 738 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 96 TTTTAVSAS 104>NP_065776 Length = 861 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>XP_005250278 Length = 657 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 4 TTTTAVSAS 12>XP_006715966 Length = 856 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>XP_005250277 Length = 862 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>XP_006715965 Length = 872 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>XP_005250276 Length = 873 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>XP_006715964 Length = 964 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>XP_006715963 Length = 975 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTTTYISAS 9 TTTT +SAS Sbjct: 220 TTTTAVSAS 228>NP_001185744 Length = 1773 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1355 TTTVYITGS 1363>XP_005275558 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>XP_005275391 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>XP_005275259 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>XP_005274965 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>XP_005272815 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>XP_005274885 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>XP_005248836 Length = 1776 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTT YI+ S Sbjct: 1358 TTTVYITGS 1366>NP_689982 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTTTYI 6 TTTTY+ Sbjct: 90 TTTTYL 95>NP_620145 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TTTYISAS 9 TT Y SAS Sbjct: 301 TTAYFSAS 308>NP_775871 Length = 8384 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TTTYISAS 9 TTTYI S Sbjct: 6499 TTTYIGES 6506>XP_006722779 Length = 335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTTTYI 6 TTTTY+ Sbjct: 136 TTTTYL 141>XP_006722778 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTTTYI 6 TTTTY+ Sbjct: 136 TTTTYL 141>XP_005259585 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTTTYI 6 TTTTY+ Sbjct: 90 TTTTYL 95>XP_006722777 Length = 751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTTTYI 6 TTTTY+ Sbjct: 136 TTTTYL 141>XP_006720088 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TTTYISAS 9 TT Y SAS Sbjct: 301 TTAYFSAS 308>XP_006720087 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TTTYISAS 9 TT Y SAS Sbjct: 308 TTAYFSAS 315>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TTTYISAS 9 +TTY+S S Sbjct: 5157 STTYLSTS 5164>NP_073577 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1171 TYISAS 1176>NP_001106710 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1144 TYISAS 1149>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTTT SAS Sbjct: 1857 TTTTSSSAS 1865>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTTT SAS Sbjct: 1970 TTTTSSSAS 1978>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTTT SAS Sbjct: 1719 TTTTSSSAS 1727>NP_001157934 Length = 5335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 312 TPTTHFSAS 320Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 1474 TPTTHFSAS 1482Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 1723 TPTTHFSAS 1731Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 3031 TPTTHFSAS 3039Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 3280 TPTTHFSAS 3288Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 4114 TPTTHFSAS 4122Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 4363 TPTTHFSAS 4371Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 T TT+ SAS Sbjct: 4556 TPTTHFSAS 4564>XP_006715999 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1143 TYISAS 1148>XP_006715998 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1164 TYISAS 1169>XP_006715997 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TYISAS 9 TYISAS Sbjct: 1170 TYISAS 1175>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTTT SAS Sbjct: 1718 TTTTSSSAS 1726>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TTTTYISAS 9 TTTT SAS Sbjct: 1969 TTTTSSSAS 1977Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.0983 0.235 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 399,507 Number of extensions: 414 Number of successful extensions: 49 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |