Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_001139416 17 3301 NP_059131 17 3301 NP_001139417 17 3301 NP_001139418 17 3301 XP_005253454 17 3301 XP_005253453 17 3301 XP_005253452 17 3301 XP_005253451 17 3301 XP_006720535 17 4312 XP_005254948 17 4312 XP_005254946 17 4312 NP_001138516 17 4312 NP_037404 17 4312 NP_003881 16 5631 NP_060686 16 5631 NP_065073 16 5631 XP_006715582 16 5631 NP_005851 16 5631 NP_079452 16 7355 NP_076404 16 7355 NP_061897 16 7355 XP_005260736 16 7355 XP_006723616 16 7355 XP_006723615 16 7355 XP_005260735 16 7355 XP_005264436 16 7355 XP_006712098 16 7355 XP_006712097 16 7355 NP_000126 15 9605 NP_006437 15 9605 NP_001486 15 9605 NP_001158511 15 9605 NP_001158510 15 9605 NP_653297 15 9605 NP_006791 15 9605 NP_001273096 15 9605 NP_001269103 15 9605 NP_001180199 15 9605 NP_523353 15 9605 NP_006353 15 9605 XP_005274497 15 9605 XP_006724524 15 9605 XP_005256351 15 9605 XP_006721231 15 9605 XP_006721230 15 9605 XP_006718483 15 9605 XP_006718482 15 9605 XP_006718481 15 9605 XP_006716390 15 9605 XP_005273532 15 9605 XP_005273531 15 9605 XP_005273530 15 9605 XP_006716389 15 9605 XP_005273529 15 9605 XP_006711224 15 9605 XP_006711222 15 9605 XP_006711221 15 9605 XP_006711220 15 9605 NP_941965 15 9605 NP_940857 15 9605 NP_001443 15 9605>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TTSTYISA 8 TTSTYISA Sbjct: 415 TTSTYISA 422>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TTSTYISA 8 TTSTYISA Sbjct: 415 TTSTYISA 422>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TTSTYISA 8 TTSTYISA Sbjct: 415 TTSTYISA 422>NP_001139416 Length = 612 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 379 TYVSAC 384>NP_059131 Length = 712 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 497 TYVSAC 502>NP_001139417 Length = 663 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 448 TYVSAC 453>NP_001139418 Length = 730 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 497 TYVSAC 502>XP_005253454 Length = 590 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 497 TYVSAC 502>XP_005253453 Length = 612 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 379 TYVSAC 384>XP_005253452 Length = 633 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 418 TYVSAC 423>XP_005253451 Length = 712 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 497 TYVSAC 502>XP_006720535 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 492 TYLSAC 497>XP_005254948 Length = 595 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 377 TYLSAC 382>XP_005254946 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 492 TYLSAC 497>NP_001138516 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 492 TYLSAC 497>NP_037404 Length = 710 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TY+SAC Sbjct: 492 TYLSAC 497>NP_003881 Length = 5405 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 +TY++AC Sbjct: 2311 ATYVAAC 2317Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 +TY++AC Sbjct: 3512 ATYVAAC 3518Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 +TY++AC Sbjct: 4713 ATYVAAC 4719>NP_060686 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 +TYI AC Sbjct: 98 NTYIEAC 104>NP_065073 Length = 2177 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TYIS+C Sbjct: 145 TYISSC 150>XP_006715582 Length = 2106 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TYIS+C Sbjct: 74 TYISSC 79>NP_005851 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TYISAC 9 TYIS+C Sbjct: 217 TYISSC 222>NP_079452 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTS+ +S C Sbjct: 298 TTSSLVSLC 306>NP_076404 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 T TY+++C Sbjct: 205 TAVTYVNSC 213>NP_061897 Length = 2071 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTST S+C Sbjct: 1020 TTSTIRSSC 1028>XP_005260736 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTS+ +S C Sbjct: 298 TTSSLVSLC 306>XP_006723616 Length = 1223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTS+ +S C Sbjct: 139 TTSSLVSLC 147>XP_006723615 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTS+ +S C Sbjct: 298 TTSSLVSLC 306>XP_005260735 Length = 1398 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTS+ +S C Sbjct: 314 TTSSLVSLC 322>XP_005264436 Length = 1881 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTST S+C Sbjct: 1020 TTSTIRSSC 1028>XP_006712098 Length = 2059 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTST S+C Sbjct: 1008 TTSTIRSSC 1016>XP_006712097 Length = 2070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 TTST S+C Sbjct: 1020 TTSTIRSSC 1028>NP_000126 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 STYISAC 9 STY AC Sbjct: 619 STYCQAC 625>NP_006437 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TYISAC 9 TYIS C Sbjct: 480 TYISPC 485>NP_001486 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 179 SSYISIC 185>NP_001158511 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 46 SSYISIC 52>NP_001158510 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 74 SSYISIC 80>NP_653297 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 S+Y+S+C Sbjct: 759 SSYLSSC 765>NP_006791 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S Y++AC Sbjct: 336 SAYVAAC 342>NP_001273096 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 STYISAC 9 STY AC Sbjct: 619 STYCQAC 625>NP_001269103 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S Y++AC Sbjct: 353 SAYVAAC 359>NP_001180199 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S Y++AC Sbjct: 490 SAYVAAC 496>NP_523353 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S Y++AC Sbjct: 502 SAYVAAC 508>NP_006353 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_005274497 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S Y++AC Sbjct: 336 SAYVAAC 342>XP_006724524 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S Y++AC Sbjct: 353 SAYVAAC 359>XP_005256351 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 STYISAC 9 STY AC Sbjct: 619 STYCQAC 625>XP_006721231 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 STYISAC 9 STY AC Sbjct: 278 STYCQAC 284>XP_006721230 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 STYISAC 9 STY AC Sbjct: 619 STYCQAC 625>XP_006718483 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_006718482 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_006718481 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STYISA 8 STYISA Sbjct: 335 STYISA 340>XP_006716390 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 179 SSYISIC 185>XP_005273532 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 60 SSYISIC 66>XP_005273531 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 88 SSYISIC 94>XP_005273530 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 179 SSYISIC 185>XP_006716389 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 179 SSYISIC 185>XP_005273529 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 STYISAC 9 S+YIS C Sbjct: 193 SSYISIC 199>XP_006711224 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 S+Y+S+C Sbjct: 759 SSYLSSC 765>XP_006711222 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 S+Y+S+C Sbjct: 717 SSYLSSC 723>XP_006711221 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 S+Y+S+C Sbjct: 759 SSYLSSC 765>XP_006711220 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 S+Y+S+C Sbjct: 759 SSYLSSC 765>NP_941965 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 T+S+Y AC Sbjct: 180 TSSSYQQAC 188>NP_940857 Length = 5147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TTSTYISAC 9 T ++Y+ AC Sbjct: 442 TFASYVQAC 450>NP_001443 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 STYISAC 9 STY+++C Sbjct: 282 STYMASC 288Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.111 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,936 Number of extensions: 992 Number of successful extensions: 66 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |