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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_005264132                                                           17    4312
NP_056988                                                              17    4312
NP_444284                                                              16    5631
XP_006718716                                                           16    5631
NP_001191230                                                           16    7355
NP_001191232                                                           16    7355
NP_001129488                                                           16    7355
NP_001191231                                                           16    7355
NP_001129603                                                           16    7355
NP_958817                                                              16    7355
NP_001129602                                                           16    7355
NP_001129601                                                           16    7355
NP_958816                                                              16    7355
NP_000475                                                              16    7355
NP_060174                                                              16    7355
NP_000450                                                              15    9605
NP_001277006                                                           15    9605
XP_005251620                                                           15    9605
XP_005251618                                                           15    9605

>XP_005264132
          Length = 1219

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   TTMELILVN 9
           TT+++IL+N
Sbjct: 870 TTIDVILIN 878



>NP_056988
          Length = 1220

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   TTMELILVN 9
           TT+++IL+N
Sbjct: 871 TTIDVILIN 879



>NP_444284
          Length = 295

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   MELILVN 9
           MEL+LVN
Sbjct: 140 MELLLVN 146



>XP_006718716
          Length = 303

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   MELILVN 9
           MEL+LVN
Sbjct: 148 MELLLVN 154



>NP_001191230
          Length = 752

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 602 TTVELLPVN 610



>NP_001191232
          Length = 677

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 527 TTVELLPVN 535



>NP_001129488
          Length = 746

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 578 TTVELLPVN 586



>NP_001191231
          Length = 733

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 583 TTVELLPVN 591



>NP_001129603
          Length = 660

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 492 TTVELLPVN 500



>NP_958817
          Length = 695

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 527 TTVELLPVN 535



>NP_001129602
          Length = 714

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 546 TTVELLPVN 554



>NP_001129601
          Length = 639

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 471 TTVELLPVN 479



>NP_958816
          Length = 751

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 583 TTVELLPVN 591



>NP_000475
          Length = 770

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TTMELILVN 9
           TT+EL+ VN
Sbjct: 602 TTVELLPVN 610



>NP_060174
          Length = 239

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   TMELILVN 9
           T+EL+L+N
Sbjct: 190 TLELLLMN 197



>NP_000450
          Length = 1124

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  MELILVN 9
          M+LIL+N
Sbjct: 24 MDLILIN 30



>NP_001277006
          Length = 1081

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  MELILVN 9
          M+LIL+N
Sbjct: 24 MDLILIN 30



>XP_005251620
          Length = 1080

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  MELILVN 9
          M+LIL+N
Sbjct: 24 MDLILIN 30



>XP_005251618
          Length = 1123

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  MELILVN 9
          M+LIL+N
Sbjct: 24 MDLILIN 30



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.322    0.134    0.324 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 358,057
Number of extensions: 290
Number of successful extensions: 19
Number of sequences better than 10000.0: 19
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 19
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)