Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 869 XP_005262424 19 869 NP_001167569 17 3301 NP_060814 17 3301 NP_056098 17 3301 NP_776173 17 3301 XP_006719419 17 3301 XP_006719416 17 3301 XP_006719415 17 3301 XP_006719414 17 3301 XP_006719413 17 3301 XP_006719411 17 3301 XP_006717973 17 3301 NP_001121084 16 5631 NP_000271 16 5631 NP_001245394 16 5631 NP_001165405 16 5631 NP_001245393 16 5631 NP_001165404 16 5631 NP_071407 16 5631 NP_001245391 16 5631 NP_001245392 16 5631 NP_001595 16 5631 XP_005253015 16 5631 XP_006718309 16 5631 XP_006718308 16 5631 XP_006718307 16 5631 XP_005253014 16 5631 XP_005253013 16 5631 XP_005253012 16 5631 XP_005253011 16 5631 XP_006718005 16 5631 XP_006718004 16 5631 XP_006718003 16 5631 XP_005275746 16 5631 XP_003403671 16 5631 XP_006710003 16 5631 NP_004516 16 7355 NP_001036064 16 7355 NP_005226 16 7355 NP_078966 16 7355 NP_001159632 16 7355 NP_001159634 16 7355 NP_001159633 16 7355 XP_006716111 16 7355 XP_005250542 16 7355 XP_006716109 16 7355 XP_006712591 16 7355 XP_006712590 16 7355 XP_006712589 16 7355 XP_005246434 16 7355 XP_005246433 16 7355 XP_005246432 16 7355 XP_006712427 16 7355 NP_004942 15 9605 NP_694996 15 9605 NP_001265227 15 9605 NP_060899 15 9605 XP_006726589 15 9605 XP_006725524 15 9605 XP_006725523 15 9605 XP_005276828 15 9605 XP_006726279 15 9605 XP_005268693 15 9605 XP_005268692 15 9605 XP_006719296 15 9605 XP_006719295 15 9605 XP_006718462 15 9605 XP_006714722 15 9605 XP_006714721 15 9605 XP_006710010 15 9605 NP_689532 15 9605>NP_722576 Length = 3080 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TTLFSTSV 8 TTLFSTSV Sbjct: 1126 TTLFSTSV 1133>XP_005262424 Length = 2875 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TTLFSTSV 8 TTLFSTSV Sbjct: 921 TTLFSTSV 928>NP_001167569 Length = 258 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTLFSTSVY 9 +T+FS+S+Y Sbjct: 179 STVFSSSIY 187>NP_060814 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTLFSTSVY 9 +T+FS+S+Y Sbjct: 179 STVFSSSIY 187>NP_056098 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 659 TTVFQNSVY 667>NP_776173 Length = 758 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 744 TTVFQNSVY 752>XP_006719419 Length = 443 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 429 TTVFQNSVY 437>XP_006719416 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 601 TTVFQNSVY 609>XP_006719415 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 601 TTVFQNSVY 609>XP_006719414 Length = 708 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 694 TTVFQNSVY 702>XP_006719413 Length = 716 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 702 TTVFQNSVY 710>XP_006719411 Length = 738 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+F SVY Sbjct: 724 TTVFQNSVY 732>XP_006717973 Length = 397 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTLFSTSVY 9 +T+FS+S+Y Sbjct: 101 STVFSSSIY 109>NP_001121084 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 291 FSTSVY 296>NP_000271 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 291 FSTSVY 296>NP_001245394 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 291 FSTSVY 296>NP_001165405 Length = 1079 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 274 FSTSVY 279>NP_001245393 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 291 FSTSVY 296>NP_001165404 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 274 FSTSVY 279>NP_071407 Length = 3354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2514 FSTSVY 2519>NP_001245391 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 305 FSTSVY 310>NP_001245392 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 305 FSTSVY 310>NP_001595 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 305 FSTSVY 310>XP_005253015 Length = 286 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 155 FSTSVY 160>XP_006718309 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 224 FSTSVY 229>XP_006718308 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 238 FSTSVY 243>XP_006718307 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 246 FSTSVY 251>XP_005253014 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 305 FSTSVY 310>XP_005253013 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 291 FSTSVY 296>XP_005253012 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 291 FSTSVY 296>XP_005253011 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 305 FSTSVY 310>XP_006718005 Length = 3397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2557 FSTSVY 2562>XP_006718004 Length = 3399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2559 FSTSVY 2564>XP_006718003 Length = 3419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2579 FSTSVY 2584>XP_005275746 Length = 3352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2512 FSTSVY 2517>XP_003403671 Length = 3354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2514 FSTSVY 2519>XP_006710003 Length = 3374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSTSVY 9 FSTSVY Sbjct: 2534 FSTSVY 2539>NP_004516 Length = 4655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLFSTSVY 9 TLF SVY Sbjct: 1649 TLFEDSVY 1656>NP_001036064 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 475 TTLFST 480>NP_005226 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 475 TTLFST 480>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TTLFSTSV 8 TTL STSV Sbjct: 886 TTLASTSV 893Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 3014 TTLFST 3019>NP_001159632 Length = 1374 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTLFSTS 7 T+LFSTS Sbjct: 1011 TSLFSTS 1017>NP_001159634 Length = 1253 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTLFSTS 7 T+LFSTS Sbjct: 989 TSLFSTS 995>NP_001159633 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTLFSTS 7 T+LFSTS Sbjct: 971 TSLFSTS 977>XP_006716111 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTLFSTS 7 T+LFSTS Sbjct: 338 TSLFSTS 344>XP_005250542 Length = 1357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTLFSTS 7 T+LFSTS Sbjct: 1032 TSLFSTS 1038>XP_006716109 Length = 1365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTLFSTS 7 T+LFSTS Sbjct: 1032 TSLFSTS 1038>XP_006712591 Length = 3308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLFSTSVY 9 TLF SVY Sbjct: 1654 TLFEDSVY 1661>XP_006712590 Length = 3897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLFSTSVY 9 TLF SVY Sbjct: 891 TLFEDSVY 898>XP_006712589 Length = 4660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TLFSTSVY 9 TLF SVY Sbjct: 1654 TLFEDSVY 1661>XP_005246434 Length = 1282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 475 TTLFST 480>XP_005246433 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 475 TTLFST 480>XP_005246432 Length = 1307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 475 TTLFST 480>XP_006712427 Length = 1323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTLFST 6 TTLFST Sbjct: 475 TTLFST 480>NP_004942 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TTLFSTSV 8 TTL+ST++ Sbjct: 66 TTLYSTNL 73>NP_694996 Length = 2526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TLFSTSVY 9 T+FS VY Sbjct: 757 TIFSVGVY 764>NP_001265227 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TLFSTSVY 9 T+FS VY Sbjct: 757 TIFSVGVY 764>NP_060899 Length = 2624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_006726589 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TLFSTS 7 TLFSTS Sbjct: 538 TLFSTS 543>XP_006725524 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_006725523 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_005276828 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_006726279 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_005268693 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TTLFSTSVY 9 T LFS S Y Sbjct: 87 TQLFSQSAY 95>XP_005268692 Length = 116 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TTLFSTSVY 9 T LFS S Y Sbjct: 104 TQLFSQSAY 112>XP_006719296 Length = 117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TTLFSTSVY 9 T LFS S Y Sbjct: 105 TQLFSQSAY 113>XP_006719295 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TTLFSTSVY 9 T LFS S Y Sbjct: 115 TQLFSQSAY 123>XP_006718462 Length = 4966 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TLFSTS 7 TLFSTS Sbjct: 4573 TLFSTS 4578>XP_006714722 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_006714721 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTLFSTSVY 9 TT+ STS Y Sbjct: 1815 TTISSTSEY 1823>XP_006710010 Length = 1103 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TLFSTS 7 TLFSTS Sbjct: 710 TLFSTS 715>NP_689532 Length = 127 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TTLFSTSVY 9 T LFS S Y Sbjct: 115 TQLFSQSAY 123Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.121 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 328,406 Number of extensions: 582 Number of successful extensions: 73 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |