Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055186 17 2528 NP_001278407 17 2528 XP_005259911 17 2528 NP_078966 16 5631 NP_001162593 16 5631 NP_002016 16 5631 NP_001162594 16 5631 NP_001162595 16 5631 NP_001162596 16 5631 NP_001164099 16 5631 XP_006723004 16 5631 NP_005238 16 7355 NP_079390 16 7355 NP_001127835 16 7355 XP_006719673 16 7355 XP_005269218 16 7355 XP_005269217 16 7355 XP_006719672 16 7355 XP_005269215 16 7355 NP_001010860 16 7355 NP_006556 15 9605 NP_001449 15 9605 NP_001120959 15 9605 NP_976036 15 9605 NP_976037 15 9605 NP_002885 15 9605 NP_001159635 15 9605 NP_001025054 15 9605 NP_001159632 15 9605 NP_001159634 15 9605 NP_001159633 15 9605 NP_004791 15 9605 NP_997190 15 9605 XP_005258383 15 9605 XP_005258382 15 9605 XP_006722585 15 9605 XP_006722584 15 9605 XP_006722583 15 9605 XP_006722582 15 9605 XP_005255832 15 9605 XP_006716111 15 9605 XP_006716110 15 9605 XP_005250542 15 9605 XP_006716109 15 9605 XP_006715973 15 9605 XP_006713883 15 9605 NP_060120 15 9605>NP_055186 Length = 646 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T KTK+TE+ Sbjct: 437 TNKTKKTEE 445>NP_001278407 Length = 585 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T KTK+TE+ Sbjct: 376 TNKTKKTEE 384>XP_005259911 Length = 612 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T KTK+TE+ Sbjct: 403 TNKTKKTEE 411>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TTKTKRTE 8 TTK RTE Sbjct: 8737 TTKVSRTE 8744>NP_001162593 Length = 1276 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTKTKRTE 8 +TK KRTE Sbjct: 918 STKPKRTE 925>NP_002016 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTKTKRTE 8 +TK KRTE Sbjct: 951 STKPKRTE 958>NP_001162594 Length = 1301 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTKTKRTE 8 +TK KRTE Sbjct: 941 STKPKRTE 948>NP_001162595 Length = 1276 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTKTKRTE 8 +TK KRTE Sbjct: 916 STKPKRTE 923>NP_001162596 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTKTKRTE 8 +TK KRTE Sbjct: 912 STKPKRTE 919>NP_001164099 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTKTKRTE 8 +TK KRTE Sbjct: 592 STKPKRTE 599>XP_006723004 Length = 6443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TTKTKRTE 8 TTK RTE Sbjct: 651 TTKVSRTE 658>NP_005238 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 KT+RT+K Sbjct: 168 KTRRTQK 174>NP_079390 Length = 2479 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 +KTK TEK Sbjct: 2194 SKTKGTEK 2201>NP_001127835 Length = 1227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 KTKRT++ Sbjct: 827 KTKRTDR 833>XP_006719673 Length = 1997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 +KTK TEK Sbjct: 1712 SKTKGTEK 1719>XP_005269218 Length = 2009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 +KTK TEK Sbjct: 1724 SKTKGTEK 1731>XP_005269217 Length = 2353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 +KTK TEK Sbjct: 2225 SKTKGTEK 2232>XP_006719672 Length = 2510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 +KTK TEK Sbjct: 2225 SKTKGTEK 2232>XP_005269215 Length = 2510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 +KTK TEK Sbjct: 2225 SKTKGTEK 2232>NP_001010860 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTKRTEK 9 T+TK TEK Sbjct: 395 TQTKPTEK 402>NP_006556 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 KTK+T+K Sbjct: 203 KTKKTKK 209>NP_001449 Length = 2725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTKRTE 8 T+T+RTE Sbjct: 2186 TRTERTE 2192>NP_001120959 Length = 2692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTKRTE 8 T+T+RTE Sbjct: 2153 TRTERTE 2159>NP_976036 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>NP_976037 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>NP_002885 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>NP_001159635 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1072 KSKKTEK 1078>NP_001025054 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTKTKRTEK 9 T+K KRT K Sbjct: 142 TSKWKRTAK 150>NP_001159632 Length = 1374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1356 KSKKTEK 1362>NP_001159634 Length = 1253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1235 KSKKTEK 1241>NP_001159633 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1278 KSKKTEK 1284>NP_004791 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TKTKRTEK 9 TKT TEK Sbjct: 125 TKTYHTEK 132>NP_997190 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+KRT+K Sbjct: 462 KSKRTDK 468>XP_005258383 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 170 TSKRKKTEE 178>XP_005258382 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>XP_006722585 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>XP_006722584 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>XP_006722583 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>XP_006722582 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKTKRTEK 9 T+K K+TE+ Sbjct: 444 TSKRKKTEE 452>XP_005255832 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 KTK+T+K Sbjct: 203 KTKKTKK 209>XP_006716111 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 683 KSKKTEK 689>XP_006716110 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1123 KSKKTEK 1129>XP_005250542 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1339 KSKKTEK 1345>XP_006716109 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1347 KSKKTEK 1353>XP_006715973 Length = 2632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTKRTE 8 T+T+RTE Sbjct: 2093 TRTERTE 2099>XP_006713883 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+KRT+K Sbjct: 447 KSKRTDK 453>NP_060120 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KTKRTEK 9 K+K+TEK Sbjct: 1080 KSKKTEK 1086Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.0993 0.232 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,750 Number of extensions: 841 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |