Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_001137357 18 1935 NP_001137358 18 1935 NP_001231919 18 1935 NP_002471 18 1935 XP_005268949 18 1935 XP_005268946 18 1935 XP_005268944 18 1935 XP_005268945 18 1935 XP_005268943 18 1935 XP_005268942 18 1935 XP_006726157 17 2528 XP_005275612 17 2528 XP_005275610 17 2528 XP_006726064 17 2528 XP_005275460 17 2528 XP_006715157 17 2528 XP_005249149 17 2528 NP_002254 17 2528 NP_001456 17 4312 NP_955367 17 4312 NP_001230022 17 4312 XP_006714529 17 4312 XP_006714528 17 4312 XP_006714527 17 4312 NP_078966 16 7355 NP_002449 16 7355 NP_064578 16 7355 XP_006718702 16 7355 XP_006718701 16 7355 XP_006718700 16 7355 XP_005274169 16 7355 XP_005274166 16 7355 XP_005274165 16 7355 XP_005274163 16 7355 NP_115921 15 9605 NP_789792 15 9605 NP_775871 15 9605 XP_006718281 15 9605 XP_005267222 15 9605>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TTKITTSST 9 TTKITT+ST Sbjct: 410 TTKITTTST 418>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TTKITTSST 9 TTKITT+ST Sbjct: 410 TTKITTTST 418>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TTKITTSST 9 TTKITT+ST Sbjct: 410 TTKITTTST 418>NP_001137357 Length = 1030 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>NP_001137358 Length = 943 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 506 TTKITTGSS 514>NP_001231919 Length = 995 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>NP_002471 Length = 1030 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>XP_005268949 Length = 987 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>XP_005268946 Length = 999 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>XP_005268944 Length = 1005 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>XP_005268945 Length = 1005 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>XP_005268943 Length = 1034 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 581 TTKITTGSS 589>XP_005268942 Length = 1046 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TTKITT S+ Sbjct: 593 TTKITTGSS 601>XP_006726157 Length = 414 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>XP_005275612 Length = 633 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 18 TTKITTS 24>XP_005275610 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>XP_006726064 Length = 414 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>XP_005275460 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>XP_006715157 Length = 414 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>XP_005249149 Length = 674 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>NP_002254 Length = 673 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TTKITTS Sbjct: 59 TTKITTS 65>NP_001456 Length = 829 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 +TK+TTS T Sbjct: 756 STKVTTSIT 764>NP_955367 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 +TK+TTS T Sbjct: 710 STKVTTSIT 718>NP_001230022 Length = 839 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 +TK+TTS T Sbjct: 766 STKVTTSIT 774>XP_006714529 Length = 829 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 +TK+TTS T Sbjct: 756 STKVTTSIT 764>XP_006714528 Length = 829 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 +TK+TTS T Sbjct: 756 STKVTTSIT 764>XP_006714527 Length = 829 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 +TK+TTS T Sbjct: 756 STKVTTSIT 764>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTKITTSST 9 T K+T SST Sbjct: 1162 TPKVTMSST 1170>NP_002449 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKITTSST 9 TK+TT++T Sbjct: 3694 TKLTTTAT 3701>NP_064578 Length = 1322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 564 TTKITT 569>XP_006718702 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 514 TTKITT 519>XP_006718701 Length = 1309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 565 TTKITT 570>XP_006718700 Length = 1216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 579 TTKITT 584>XP_005274169 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 528 TTKITT 533>XP_005274166 Length = 1323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 579 TTKITT 584>XP_005274165 Length = 1323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 565 TTKITT 570>XP_005274163 Length = 1337 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTKITT 6 TTKITT Sbjct: 579 TTKITT 584>NP_115921 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TT+ TT++T Sbjct: 1494 TTRTTTTTT 1502>NP_789792 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TT++TTS Sbjct: 306 TTRLTTS 312>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TTKITTS 7 TTK TTS Sbjct: 6987 TTKTTTS 6993Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TTKITTS 7 TTK TTS Sbjct: 7105 TTKTTTS 7111>XP_006718281 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TTKITTS 7 TT++TTS Sbjct: 196 TTRLTTS 202>XP_005267222 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTKITTSST 9 TT+ TT++T Sbjct: 1419 TTRTTTTTT 1427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.281 0.0889 0.194 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 246,020 Number of extensions: 322 Number of successful extensions: 43 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |