Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_001191273 17 2528 NP_005109 17 2528 NP_597702 17 2528 NP_115642 17 4312 NP_005038 17 4312 NP_001257356 17 4312 NP_001138502 16 5631 NP_064613 16 5631 NP_955469 16 5631 NP_955471 16 5631 NP_955470 16 5631 NP_569120 16 7355 NP_569122 16 7355 NP_001387 16 7355 NP_567824 16 7355 NP_789763 16 7355 NP_789762 16 7355 NP_789764 16 7355 NP_115488 16 7355 XP_005260990 16 7355 XP_005260988 16 7355 XP_006724042 16 7355 XP_006724041 16 7355 XP_006724040 16 7355 XP_006724039 16 7355 XP_006718098 16 7355 XP_005270288 16 7355 XP_005270287 16 7355 NP_075380 15 9605 NP_872299 15 9605 NP_006292 15 9605 NP_001180440 15 9605 NP_597705 15 9605 NP_003765 15 9605 NP_001186710 15 9605 NP_001128128 15 9605 NP_001186711 15 9605 XP_005256292 15 9605 XP_006721397 15 9605 XP_005256291 15 9605 XP_005256290 15 9605 XP_006721396 15 9605 XP_006719652 15 9605 XP_006719651 15 9605 XP_005269195 15 9605 XP_006718578 15 9605 XP_006718577 15 9605 XP_006718574 15 9605 XP_006718570 15 9605 NP_872362 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRGISSE Sbjct: 491 TFRGISSE 498>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRGISSE Sbjct: 143 TFRGISSE 150>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRGISSE Sbjct: 491 TFRGISSE 498>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRGISSE Sbjct: 491 TFRGISSE 498>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRGISSE Sbjct: 491 TFRGISSE 498>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRGISSE Sbjct: 491 TFRGISSE 498>NP_001191273 Length = 192 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRG++SE Sbjct: 95 TFRGMTSE 102>NP_005109 Length = 251 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TFRGISSE 9 TFRG++SE Sbjct: 154 TFRGMTSE 161>NP_597702 Length = 1115 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TTFRGIS 7 TTFRG+S Sbjct: 440 TTFRGLS 446>NP_115642 Length = 1984 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTFRGISSE 9 +TF GIS E Sbjct: 1002 STFNGISQE 1010>NP_005038 Length = 504 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FRGISSE 9 FRGISS+ Sbjct: 399 FRGISSQ 405>NP_001257356 Length = 461 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 FRGISSE 9 FRGISS+ Sbjct: 356 FRGISSQ 362>NP_001138502 Length = 1692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFRGISSE 9 TFR +SSE Sbjct: 828 TFRPVSSE 835>NP_064613 Length = 1160 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFRGISSE 9 +FRG SSE Sbjct: 1054 SFRGYSSE 1061>NP_955469 Length = 1156 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFRGISSE 9 +FRG SSE Sbjct: 1050 SFRGYSSE 1057>NP_955471 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFRGISSE 9 +FRG SSE Sbjct: 917 SFRGYSSE 924>NP_955470 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TFRGISSE 9 +FRG SSE Sbjct: 955 SFRGYSSE 962>NP_569120 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 243 TNFRGVS 249>NP_569122 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 252 TNFRGVS 258>NP_001387 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 252 TNFRGVS 258>NP_567824 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 252 TNFRGVS 258>NP_789763 Length = 202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>NP_789762 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>NP_789764 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>NP_115488 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>XP_005260990 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 24 TNFRGVS 30>XP_005260988 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 223 TNFRGVS 229>XP_006724042 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 243 TNFRGVS 249>XP_006724041 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 252 TNFRGVS 258>XP_006724040 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 252 TNFRGVS 258>XP_006724039 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTFRGIS 7 T FRG+S Sbjct: 252 TNFRGVS 258>XP_006718098 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>XP_005270288 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>XP_005270287 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TTFRG+ Sbjct: 138 TTFRGL 143>NP_075380 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 FRGISSE 9 FRG SSE Sbjct: 278 FRGSSSE 284>NP_872299 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFRGISSE 9 TF G+S E Sbjct: 735 TFEGLSEE 742>NP_006292 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 715 RGISSE 720>NP_001180440 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 748 RGISSE 753>NP_597705 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TTFRGISSE 9 TTF +SS+ Sbjct: 1048 TTFTAVSSD 1056>NP_003765 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 451 RGISSE 456>NP_001186710 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 448 RGISSE 453>NP_001128128 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 106 RGISSE 111>NP_001186711 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 279 RGISSE 284>XP_005256292 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFRGISSE 9 TF G+S E Sbjct: 394 TFEGLSEE 401>XP_006721397 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFRGISSE 9 TF G+S E Sbjct: 394 TFEGLSEE 401>XP_005256291 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFRGISSE 9 TF G+S E Sbjct: 594 TFEGLSEE 601>XP_005256290 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFRGISSE 9 TF G+S E Sbjct: 605 TFEGLSEE 612>XP_006721396 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TFRGISSE 9 TF G+S E Sbjct: 735 TFEGLSEE 742>XP_006719652 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 615 RGISSE 620>XP_006719651 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 748 RGISSE 753>XP_005269195 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RGISSE 9 RGISSE Sbjct: 748 RGISSE 753>XP_006718578 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TT+RGI Sbjct: 34 TTYRGI 39>XP_006718577 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TT+RGI Sbjct: 34 TTYRGI 39>XP_006718574 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TT+RGI Sbjct: 34 TTYRGI 39>XP_006718570 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TT+RGI Sbjct: 34 TTYRGI 39>NP_872362 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TTFRGI 6 TT+RGI Sbjct: 34 TTYRGI 39Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.124 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,283 Number of extensions: 477 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |