Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 509 NP_005559 16 5631 NP_055893 16 5631 NP_001002913 16 5631 XP_006717018 16 5631 NP_001159743 16 7355 NP_001273721 16 7355 NP_001138498 16 7355 NP_001273723 16 7355 NP_001273724 16 7355 NP_001273722 16 7355 NP_694568 16 7355 NP_079357 16 7355 NP_071758 16 7355 NP_004963 15 9605 NP_776297 15 9605 NP_115921 15 9605 NP_005447 15 9605 NP_001095939 15 9605 XP_005253283 15 9605 XP_006718009 15 9605 XP_005270106 15 9605 XP_005251512 15 9605 XP_005267222 15 9605 XP_005262783 15 9605>NP_004110 Length = 993 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TEEIYIIM 9 TEEIYIIM Sbjct: 915 TEEIYIIM 922>NP_005559 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTEEIYII 8 T EE+YII Sbjct: 100 TGEELYII 107>NP_055893 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TEEIYI 7 TEEIYI Sbjct: 630 TEEIYI 635>NP_001002913 Length = 214 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TTEEIYII 8 T EE+Y++ Sbjct: 112 TAEEVYLV 119>XP_006717018 Length = 196 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TTEEIYII 8 T EE+Y++ Sbjct: 125 TAEEVYLV 132>NP_001159743 Length = 1277 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TTEEIYI 7 TT+E+Y+ Sbjct: 1159 TTDEVYL 1165>NP_001273721 Length = 1339 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TTEEIYI 7 TT+E+Y+ Sbjct: 1221 TTDEVYL 1227>NP_001138498 Length = 2299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EEIYII 8 EEIYII Sbjct: 1839 EEIYII 1844>NP_001273723 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TTEEIYI 7 TT+E+Y+ Sbjct: 478 TTDEVYL 484>NP_001273724 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TTEEIYI 7 TT+E+Y+ Sbjct: 456 TTDEVYL 462>NP_001273722 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TTEEIYI 7 TT+E+Y+ Sbjct: 394 TTDEVYL 400>NP_694568 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TTEEIYI 7 TT+E+Y+ Sbjct: 534 TTDEVYL 540>NP_079357 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTEEIYIIM 9 T E+I+I+M Sbjct: 896 TNEQIHILM 904>NP_071758 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TTEEIYII 8 T EE+Y+I Sbjct: 101 TGEELYVI 108>NP_004963 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EEIYIIM 9 +EIY+IM Sbjct: 1096 DEIYMIM 1102>NP_776297 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TTEEIYII 8 T EE+Y++ Sbjct: 854 TEEEVYLL 861>NP_115921 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TEEIYII 8 TEE Y+I Sbjct: 1554 TEEAYVI 1560>NP_005447 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TEEIYI 7 TEEIY+ Sbjct: 278 TEEIYL 283>NP_001095939 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTEEIYIIM 9 TTE+ YI++ Sbjct: 53 TTEDGYILL 61>XP_005253283 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TEEIYI 7 TEEIY+ Sbjct: 268 TEEIYL 273>XP_006718009 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTEEIYIIM 9 TTE+ YI++ Sbjct: 58 TTEDGYILL 66>XP_005270106 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTEEIYIIM 9 TTE+ YI++ Sbjct: 53 TTEDGYILL 61>XP_005251512 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EEIYIIM 9 +EIY+IM Sbjct: 1096 DEIYMIM 1102>XP_005267222 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TEEIYII 8 TEE Y+I Sbjct: 1479 TEEAYVI 1485>XP_005262783 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TTEEIYII 8 T EE+Y++ Sbjct: 827 TEEEVYLL 834Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.139 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 505,791 Number of extensions: 652 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |