Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001123914 20 509 NP_005334 20 509 NP_004976 20 509 NP_002515 20 509 NP_853510 20 509 NP_001018075 16 5631 NP_006171 16 5631 NP_570925 16 5631 NP_570924 16 5631 NP_570923 16 5631 NP_006755 16 5631 NP_002841 16 5631 NP_569707 16 5631 NP_002831 16 5631 XP_006722884 16 5631 XP_005259667 16 5631 XP_005259666 16 5631 XP_006722883 16 5631 XP_006722882 16 5631 XP_006722881 16 5631 XP_005259664 16 5631 XP_005259663 16 5631 XP_006722880 16 5631 XP_006722879 16 5631 XP_006722878 16 5631 XP_006722877 16 5631 XP_006722876 16 5631 XP_006722875 16 5631 XP_005259658 16 5631 XP_005259657 16 5631 XP_006722874 16 5631 XP_006722873 16 5631 XP_006722872 16 5631 XP_006722871 16 5631 XP_005252063 16 5631 XP_006717183 16 5631 XP_005252061 16 5631 XP_005252060 16 5631 XP_005252058 16 5631 XP_006710864 16 5631 XP_005271139 16 5631 XP_006710863 16 5631 XP_006710862 16 5631 XP_006710861 16 5631 XP_005271138 16 5631 XP_006710860 16 5631 XP_006710859 16 5631 XP_005271137 16 5631 XP_006710858 16 5631 XP_005271136 16 5631 NP_573439 16 7355 NP_573438 16 7355 NP_001181930 16 7355 NP_005695 16 7355 XP_006710336 16 7355 XP_006710335 16 7355 XP_006710334 16 7355 XP_006710333 16 7355 XP_006710332 16 7355 NP_004031 15 9605 NP_005264 15 9605 NP_786886 15 9605 NP_001036143 15 9605 NP_001036144 15 9605 NP_060918 15 9605>NP_001123914 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSVKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_005334 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSVKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_004976 Length = 188 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSVKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_002515 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSVKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_853510 Length = 233 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSVKTRQGV 9 TS KTRQGV Sbjct: 180 TSAKTRQGV 188>NP_001018075 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>NP_006171 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>NP_570925 Length = 1505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>NP_570924 Length = 1910 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>NP_570923 Length = 1501 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>NP_006755 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SVKTRQG 8 S KTRQG Sbjct: 152 SAKTRQG 158>NP_002841 Length = 1948 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 518 VKTQQGV 524>NP_569707 Length = 1898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>NP_002831 Length = 1907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006722884 Length = 1490 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_005259667 Length = 1497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_005259666 Length = 1501 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006722883 Length = 1510 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722882 Length = 1522 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722881 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_005259664 Length = 1906 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_005259663 Length = 1910 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006722880 Length = 1915 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722879 Length = 1917 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722878 Length = 1924 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722877 Length = 1928 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722876 Length = 1933 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722875 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_005259658 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_005259657 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006722874 Length = 1940 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722873 Length = 1944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722872 Length = 1944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_006722871 Length = 1944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 514 VKTQQGV 520>XP_005252063 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>XP_006717183 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>XP_005252061 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>XP_005252060 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>XP_005252058 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VK+RQGV Sbjct: 475 VKSRQGV 481>XP_006710864 Length = 1729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_005271139 Length = 1796 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006710863 Length = 1811 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_006710862 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_006710861 Length = 1902 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_005271138 Length = 1909 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006710860 Length = 1911 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_006710859 Length = 1913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_005271137 Length = 1918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 505 VKTQQGV 511>XP_006710858 Length = 1922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>XP_005271136 Length = 1922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VKTRQGV 9 VKT+QGV Sbjct: 509 VKTQQGV 515>NP_573439 Length = 1436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>NP_573438 Length = 1440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>NP_001181930 Length = 1433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>NP_005695 Length = 1446 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>XP_006710336 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 174 VKTEQGV 180>XP_006710335 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 367 VKTEQGV 373>XP_006710334 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>XP_006710333 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>XP_006710332 Length = 1442 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VKTRQGV 9 VKT QGV Sbjct: 439 VKTEQGV 445>NP_004031 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_005264 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SVKTRQG 8 S+KTR+G Sbjct: 125 SLKTREG 131>NP_786886 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_001036143 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_001036144 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_060918 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SVKTRQ 7 SVKTRQ Sbjct: 447 SVKTRQ 452Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.117 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,550 Number of extensions: 444 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |