Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 869 XP_005262424 19 869 NP_849144 18 1935 XP_006713662 18 1935 XP_006713661 18 1935 XP_006713660 18 1935 XP_005247434 18 1935 XP_006713659 18 1935 NP_001027006 17 2528 NP_065974 17 3301 NP_001272478 17 3301 XP_006712719 17 3301 XP_005246770 17 3301 XP_005246768 17 3301 XP_005246769 17 3301 NP_000564 17 4312 NP_000642 17 4312 XP_006711231 17 4312 XP_005273121 17 4312 XP_006711230 17 4312 XP_006711229 17 4312 NP_006173 16 7355 NP_001014796 16 7355 XP_006711408 16 7355 XP_006711407 16 7355 XP_005245278 16 7355 NP_001093321 15 9605 NP_001038945 15 9605 NP_001230175 15 9605 NP_001269683 15 9605 NP_000435 15 9605 NP_056049 15 9605 NP_001091988 15 9605 NP_002510 15 9605 NP_775871 15 9605 XP_005248952 15 9605 XP_005248951 15 9605 XP_005248950 15 9605 XP_005248949 15 9605 XP_001718723 15 9605>NP_722576 Length = 3080 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 TST ALSFP Sbjct: 1180 TSTYALSFP 1188>XP_005262424 Length = 2875 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 TST ALSFP Sbjct: 975 TSTYALSFP 983>NP_849144 Length = 2623 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 T+T ALSFP Sbjct: 1074 TATAALSFP 1082>XP_006713662 Length = 1846 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 T+T ALSFP Sbjct: 1146 TATAALSFP 1154>XP_006713661 Length = 1860 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 T+T ALSFP Sbjct: 1146 TATAALSFP 1154>XP_006713660 Length = 2623 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 T+T ALSFP Sbjct: 1074 TATAALSFP 1082>XP_005247434 Length = 2623 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 T+T ALSFP Sbjct: 1074 TATAALSFP 1082>XP_006713659 Length = 2695 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 T+T ALSFP Sbjct: 1146 TATAALSFP 1154>NP_001027006 Length = 1149 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TNALSFP 9 TN+LSFP Sbjct: 1096 TNSLSFP 1102>NP_065974 Length = 2354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTNALSFP 9 TS+N L FP Sbjct: 2183 TSSNKLGFP 2191>NP_001272478 Length = 2352 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTNALSFP 9 TS+N L FP Sbjct: 2181 TSSNKLGFP 2189>XP_006712719 Length = 2354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTNALSFP 9 TS+N L FP Sbjct: 2183 TSSNKLGFP 2191>XP_005246770 Length = 2354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTNALSFP 9 TS+N L FP Sbjct: 2183 TSSNKLGFP 2191>XP_005246768 Length = 2354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTNALSFP 9 TS+N L FP Sbjct: 2183 TSSNKLGFP 2191>XP_005246769 Length = 2354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTNALSFP 9 TS+N L FP Sbjct: 2183 TSSNKLGFP 2191>NP_000564 Length = 2039 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 506 TQTNASDFP 514Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 956 TQTNASDFP 964>NP_000642 Length = 2489 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 506 TQTNASDFP 514Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 956 TQTNASDFP 964Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 1406 TQTNASDFP 1414>XP_006711231 Length = 2044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 511 TQTNASDFP 519Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 961 TQTNASDFP 969>XP_005273121 Length = 2361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 511 TQTNASDFP 519Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 961 TQTNASDFP 969Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 1278 TQTNASDFP 1286>XP_006711230 Length = 2361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 511 TQTNASDFP 519Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 961 TQTNASDFP 969Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 1411 TQTNASDFP 1419>XP_006711229 Length = 2459 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 511 TQTNASDFP 519Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 961 TQTNASDFP 969Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TSTNALSFP 9 T TNA FP Sbjct: 1411 TQTNASDFP 1419>NP_006173 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 NA+SFP Sbjct: 316 NAISFP 321>NP_001014796 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 NA+SFP Sbjct: 316 NAISFP 321>XP_006711408 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 NA+SFP Sbjct: 328 NAISFP 333>XP_006711407 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 NA+SFP Sbjct: 316 NAISFP 321>XP_005245278 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 NA+SFP Sbjct: 328 NAISFP 333>NP_001093321 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSTNAL 6 TSTNAL Sbjct: 389 TSTNAL 394>NP_001038945 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TSTNAL 6 TSTNAL Sbjct: 389 TSTNAL 394>NP_001230175 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TSTNALS 7 TS+NALS Sbjct: 729 TSSNALS 735>NP_001269683 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STNALSFP 9 STN + FP Sbjct: 544 STNQIRFP 551>NP_000435 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 STNALSFP 9 STN + FP Sbjct: 544 STNQIRFP 551>NP_056049 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 N+LSFP Sbjct: 85 NSLSFP 90>NP_001091988 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 N+LSFP Sbjct: 85 NSLSFP 90>NP_002510 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 NA+SFP Sbjct: 1091 NAVSFP 1096>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TSTNALS 7 T TNALS Sbjct: 5250 TGTNALS 5256>XP_005248952 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 N+LSFP Sbjct: 85 NSLSFP 90>XP_005248951 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 N+LSFP Sbjct: 85 NSLSFP 90>XP_005248950 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 N+LSFP Sbjct: 85 NSLSFP 90>XP_005248949 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NALSFP 9 N+LSFP Sbjct: 85 NSLSFP 90>XP_001718723 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTNALSFP 9 TST+ ++FP Sbjct: 50 TSTSHVTFP 58Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.114 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,608 Number of extensions: 532 Number of successful extensions: 50 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |