Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001123914 20 509 NP_005334 20 509 NP_004976 20 509 NP_002515 20 509 NP_853510 20 509 NP_002126 16 5631 NP_001189162 16 5631 NP_775180 16 5631 NP_056374 16 5631 NP_006755 16 5631 NP_001624 16 5631 NP_066278 16 5631 NP_001258662 16 5631 XP_006722501 16 5631 XP_005258301 16 5631 XP_005258300 16 5631 XP_006719427 16 5631 XP_005268881 16 5631 XP_006719426 16 5631 XP_005268880 16 5631 XP_005268879 16 5631 XP_006713232 16 5631 XP_006713231 16 5631 XP_006713230 16 5631 XP_006713229 16 5631 NP_005805 16 7355 NP_849188 16 7355 NP_036473 16 7355 NP_001265238 16 7355 NP_006413 16 7355 XP_006725006 16 7355 XP_005253722 16 7355 XP_005253721 16 7355 XP_006719014 16 7355 XP_006717500 16 7355 NP_004031 15 9605 NP_078911 15 9605 NP_001138923 15 9605 NP_786886 15 9605 NP_001036143 15 9605 NP_003076 15 9605 NP_001036144 15 9605 NP_001001502 15 9605 XP_005252185 15 9605 XP_006717294 15 9605 XP_005252184 15 9605 XP_005252183 15 9605 XP_006714979 15 9605 XP_006714978 15 9605 XP_006714977 15 9605>NP_001123914 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_005334 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_004976 Length = 188 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_002515 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TS KTRQGV Sbjct: 144 TSAKTRQGV 152>NP_853510 Length = 233 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TS KTRQGV Sbjct: 180 TSAKTRQGV 188>NP_002126 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 251 TSTKARSG 258>NP_001189162 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 264 TSTKARSG 271>NP_775180 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 251 TSTKARSG 258>NP_056374 Length = 1596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 909 TSTKNRHG 916>NP_006755 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STKTRQG 8 S KTRQG Sbjct: 152 SAKTRQG 158>NP_001624 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TST+ R+GV Sbjct: 82 TSTRWRKGV 90>NP_066278 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 T +KTR+GV Sbjct: 395 TVSKTRKGV 403>NP_001258662 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 T +KTR+GV Sbjct: 365 TVSKTRKGV 373>XP_006722501 Length = 1403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 909 TSTKNRHG 916>XP_005258301 Length = 1539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 909 TSTKNRHG 916>XP_005258300 Length = 1596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 909 TSTKNRHG 916>XP_006719427 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 251 TSTKARSG 258>XP_005268881 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 251 TSTKARSG 258>XP_006719426 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 251 TSTKARSG 258>XP_005268880 Length = 652 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 305 TSTKARSG 312>XP_005268879 Length = 670 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TSTKTRQG 8 TSTK R G Sbjct: 323 TSTKARSG 330>XP_006713232 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 T +KTR+GV Sbjct: 395 TVSKTRKGV 403>XP_006713231 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 T +KTR+GV Sbjct: 295 TVSKTRKGV 303>XP_006713230 Length = 655 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 T +KTR+GV Sbjct: 395 TVSKTRKGV 403>XP_006713229 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 T +KTR+GV Sbjct: 350 TVSKTRKGV 358>NP_005805 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TSTKTRQGV 9 TST +R+G+ Sbjct: 47 TSTSSREGL 55>NP_849188 Length = 2400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TSTKTRQG 8 TST+T QG Sbjct: 1718 TSTRTVQG 1725>NP_036473 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTKTRQGV 9 TST T +GV Sbjct: 320 TSTLTEEGV 328>NP_001265238 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STKTRQG 8 STK RQG Sbjct: 223 STKERQG 229>NP_006413 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STKTRQG 8 STK RQG Sbjct: 223 STKERQG 229>XP_006725006 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTKTRQGV 9 TST T +GV Sbjct: 273 TSTLTEEGV 281>XP_005253722 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STKTRQG 8 STK RQG Sbjct: 223 STKERQG 229>XP_005253721 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STKTRQG 8 STK RQG Sbjct: 223 STKERQG 229>XP_006719014 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 STKTRQG 8 STK RQG Sbjct: 223 STKERQG 229>XP_006717500 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TSTKTRQGV 9 TST T +GV Sbjct: 225 TSTLTEEGV 233>NP_004031 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_078911 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STKTRQG 8 ST++RQG Sbjct: 210 STRSRQG 216>NP_001138923 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TKTRQG 8 TKT+QG Sbjct: 4 TKTKQG 9>NP_786886 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_001036143 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_003076 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKTRQGV 9 +KTR+GV Sbjct: 42 SKTREGV 48>NP_001036144 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STKTRQGV 9 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_001001502 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKTRQGV 9 +KTR+GV Sbjct: 42 SKTREGV 48>XP_005252185 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STKTRQG 8 ST++RQG Sbjct: 54 STRSRQG 60>XP_006717294 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STKTRQG 8 ST++RQG Sbjct: 210 STRSRQG 216>XP_005252184 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STKTRQG 8 ST++RQG Sbjct: 210 STRSRQG 216>XP_005252183 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 STKTRQG 8 ST++RQG Sbjct: 210 STRSRQG 216>XP_006714979 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKTRQGV 9 +KTR+GV Sbjct: 42 SKTREGV 48>XP_006714978 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKTRQGV 9 +KTR+GV Sbjct: 42 SKTREGV 48>XP_006714977 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TKTRQGV 9 +KTR+GV Sbjct: 42 SKTREGV 48Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.109 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,121 Number of extensions: 685 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |